LOCUS LJ589813 2177 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq5.
ACCESSION LJ589813
VERSION LJ589813.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2177)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2177
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 784 a 328 c 382 g 683 t
ORIGIN
1 gaatctaagg tagtataaaa agtacaaaaa aaaatacgaa aagtttaaag attaaaaaaa
61 aactatttac aaaaattcta tttacctaac ctgcaatctc ttgctttttc agtgatgagg
121 tgacaaaatt cttaataagg tatcagaagt aaaagatgta tgcaaaatgc ttcatcttct
181 ttgcgcttgc ttgtatattg atacttgcaa gagcatgtta tctgatattc atcaaaagta
241 ataagcccag agaaaaacct tgtcctgtta aaacaatgat aatattagga tccggtgggc
301 acacggccga aatgctgcga attgttaaac acttgaacat taagaattat tcacctagag
361 tttacattca tgctcgtaca gataaactta gcgcagaaaa agttagggaa ctagagagtg
421 gcaacacaga tcacaaaatt gtggaaattt acagaagtcg agaagttcgg cagtcgtact
481 ttacgtcaat ttggactact gtacttgcca cactaaattg tcttccaatg ttatggagag
541 aaaagccaga actcatttta tgcaatggtc ctggcacttg tgtaccttta tgtgtcatag
601 catttttatt taaaatctta tttattacag aaaacgttat tgtattcata gaaagtttct
661 gtagagttaa aactttctcg ttaacaggaa aaatcttgta ttacttagct gatcatgtta
721 ttgtgcgatg ggcgtactta actaaaccta tgtatagcag aagcatttgt ttataagtaa
781 atactttcaa ttatatttta tattgtcata attgtatacc tgaaataatt tacagaaaat
841 ggcttgcagt gattctatga taacagtctc ctgggaattg ttaacaaaag aattgaaaaa
901 tatacctatt gaaataaaac tacacttgac atcaataatc aacatactac aaacatctga
961 caaacaatta acttcagaaa agtggataaa tgcttcaata acaagagtgg aagcttgttt
1021 agaccgcaca tgggaggtat tgaattcagg ctactggaaa gatgtctcaa tagaatacag
1081 atattgttat tctctatgtg ttattgtaaa ggctgtatta ttagaacttc agtataaaat
1141 aaatgctgaa agttgtgctg ataaagagaa gaaaaagact gtattgaaga atattattaa
1201 ccaaattgat agaggcattt tgttaggcgc acctcttccc agtatgccaa atttattaac
1261 agctattgcc acgaagttaa ataactgtta tgctgaagaa tctgatacta taaatataga
1321 agatatttca attaatcatg aaaggactga ctacttaatt tctaattgcc cggatagata
1381 ttttgaaaaa ccttcaatgc aaacatttta caataaaatt tttatgccaa agttaccagc
1441 tgtattaaca gagtgtataa ctcactggaa agcgttaaca ttatggaaga attctaatta
1501 tttgaataaa gttgcgggat ctcggacagt acctattgaa attggatccc gttatactga
1561 agaagattgg acacagaatc ttgttaattt ttctgaattt ttacaaaagc acgttattgc
1621 aagtaacagt gaagttgggt atttagcaca acatcaatta ttcgaacaga taccagaatt
1681 gaaagaggat tttgaagtac cagagtattg ttgcttttcg gatagcgaag agaatgatgc
1741 agaatcatca gaagttgata taaacgcttg gtttggaccc gctaatacag tgtcgccttt
1801 gcattttgat ccaaaaaaca atctgctttc tcaggtattt ggttacaaaa gagttatctt
1861 gtattctcca accgaaactg ataagttata tccttatgac agtagattac ttaacaatac
1921 tgcgcaagta gatcctataa ggccagatta cgacaagtgg ccgaattttc gtgaagccaa
1981 tggcatgacg gtttacttaa agcccggaga aatgttgtat attccaccaa aatggtggca
2041 tcatgtaacc gctcttactc cgagtttttc gatcagtttc tggtggaatt aatgtttatt
2101 ttgaatataa atatgcaata caatttacaa atggattaaa taaaaattgt ttgttaaagt
2161 taaaaaaaaa aaaaaaa
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