LOCUS LJ589812 1481 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58893.graph_c0_seq4.
ACCESSION LJ589812
VERSION LJ589812.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1481)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1481
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58893.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 552 a 218 c 257 g 454 t
ORIGIN
1 gaatctaagg tagtataaaa agtacaaaaa aaaatacgaa aagtttaaag attaaaaaaa
61 aactatttac aaaaattcta tttacctaac ctgcaatctc ttgctttttc agtgatgagg
121 tgacaaaatt cttaataaga aaatggcttg cagtgattct atgataacag tctcctggga
181 attgttaaca aaagaattga aaaatatacc tattgaaata aaactacact tgacatcaat
241 aatcaacata ctacaaacat ctgacaaaca attaacttca gaaaagtgga taaatgcttc
301 aataacaaga gtggaagctt gtttagaccg cacatgggag gtattgaatt caggctactg
361 gaaagatgtc tcaatagaat acagatattg ttattctcta tgtgttattg taaaggctgt
421 attattagaa cttcagtata aaataaatgc tgaaagttgt gctgataaag agaagaaaaa
481 gactgtattg aagaatatta ttaaccaaat tgatagaggc attttgttag gcgcacctct
541 tcccagtatg ccaaatttat taacagctat tgccacgaag ttaaataact gttatgctga
601 agaatctgat actataaata tagaagatat ttcaattaat catgaaagga ctgactactt
661 aatttctaat tgcccggata gatattttga aaaaccttca atgcaaacat tttacaataa
721 aatttttatg ccaaagttac cagctgtatt aacagagtgt ataactcact ggaaagcgtt
781 aacattatgg aagaattcta attatttgaa taaagttgcg ggatctcgga cagtacctat
841 tgaaattgga tcccgttata ctgaagaaga ttggacacag aatcttgtta atttttctga
901 atttttacaa aagcacgtta ttgcaagtaa cagtgaagtt gggtatttag cacaacatca
961 attattcgaa cagataccag aattgaaaga ggattttgaa gtaccagagt attgttgctt
1021 ttcggatagc gaagagaatg atgcagaatc atcagaagtt gatataaacg cttggtttgg
1081 acccgctaat acagtgtcgc ctttgcattt tgatccaaaa aacaatctgc tttctcaggt
1141 atttggttac aaaagagtta tcttgtattc tccaaccgaa actgataagt tatatcctta
1201 tgacagtaga ttacttaaca atactgcgca agtagatcct ataaggccag attacgacaa
1261 gtggccgaat tttcgtgaag ccaatggcat gacggtttac ttaaagcccg gagaaatgtt
1321 gtatattcca ccaaaatggt ggcatcatgt aaccgctctt actccgagtt tttcgatcag
1381 tttctggtgg aattaatgtt tattttgaat ataaatatgc aatacaattt acaaatggat
1441 taaataaaaa ttgtttgtta aagttaaaaa aaaaaaaaaa a
//