LOCUS LJ589496 1516 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58876.graph_c0_seq1.
ACCESSION LJ589496
VERSION LJ589496.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1516)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1516
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58876.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 571 a 222 c 344 g 379 t
ORIGIN
1 ggctcttaga ttgaggttag atttaaataa aaacgcgaga caacgtgggt atcataagtt
61 atcatttata cttctttgga acctttatat tatttgcaaa tatggttcgc agaaaaagaa
121 cgaagaaacc tctgaataat gaggacattg atgatattga tgatgatatg gaggatgtgg
181 atatgaatgc tgtgacagat tcagaggaag aatatacaga aaccgaaaag aaattgcttg
241 agaaagttcg gaaacagcgc accactgaga attttgatag tgacgacgaa gtttacggac
301 tgcaagatgg cagcgaggat gacgaagacg atcagcagga ctctatggag tctgatattg
361 aagggatgca agaagattac gatttgccaa atgacagggc ctggggtagc aaaacaaaag
421 ctttttactc gtcagatttt aaatatacgg attatgcatc ggcgcctcaa aaggacttga
481 tcaatgcgga gatggaggag gaagaaggaa agaggctaca cttgagatca atgggacaac
541 atttggctct tgatggttca aattttatca agaataaagt agctgaagtt acagaggaca
601 ttaaaattgt tcaagatgat tctaaacaag tatctgataa agaatctttt atgattatgg
661 ttgatacctt taaagaatac atgacggaag taaaggatat tttagcaccc ttcctagaat
721 tggttaagga tggaacgtgt cctgaatgcg atgcagtaac ttttgccaga actaagtatg
781 agattatatt aaattattgt acaaacatct cgttttgttt actgctgaaa accagaggaa
841 aaccagtaaa atcgcatcca gttgtaaagc gcctggagca gtaccgtcat ttgctcgatc
901 aattacaatt acagcaggga gacttgctgg aacaagtaac ggaaatactg aaagcagtta
961 aagaaggtag accactctac agcatatcag atggttctcg aatacaatct aataaaaaga
1021 caccaagact tctcagcttg actaaaaagc tggcacgtaa aaaagaagaa gcaataatgc
1081 gagaagaaca gttattatct gacagtatag atgaagaaag catggatgaa gatttagata
1141 tcgaggagaa gcatgatgat aaatttttgg ctgatgaaaa ggacaatacc attctaaata
1201 ccatggacga agaagctaaa agagcgataa cgtaccaaat tgcgaaaaac agaggtctta
1261 cgccttatcg caagaaagaa ttgcgcaatc caagagtgaa gcacagaaat aaatatcgta
1321 aagcaaagat tcgcagaaag ggcgcggtga gagaggtgag aacggaactg actcgttact
1381 caggcgagat ctcgggtatc aaagcaggtg tgaagaaagg cattaaattc aaataatgga
1441 aagattttat cccatataaa ttatgtgcat attttttctg aatatatgaa tattattttt
1501 aaaaaaaaaa aaaaaa
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