LOCUS LJ589484 944 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58883.graph_c0_seq3.
ACCESSION LJ589484
VERSION LJ589484.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 944)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..944
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58883.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 296 a 152 c 187 g 309 t
ORIGIN
1 atgctaagaa gcgctgtaaa atggaggaat gtgccgtcac aaacgaagag tcttacgaac
61 agcccgcgga ttggaatgac acgccgctaa ttcgaggaac cgaggagtcg gaatcctccg
121 atccatccct gagaatatcg cacagcaatt cgttcatgat ggaagatgag ttcgacgcaa
181 tcggccgcaa cgttgccgcc aagctcagga atatgagact ggaccaaaga ataatagctg
241 agaaattatt gaacgacatt ttatttgagg ctcagcttgg taatcttcac agagattcaa
301 gtatccacgt gtgagaggga tgtacaaacg gcctgtgaga caatgctgta tatctttcag
361 tgaatcgcga aagaacgatc tttcgtccga tttggcgaaa agcgacgtga tatgattaat
421 aaagttatct aattcgttat ataacatcag cgttattacg cgctagtatg catgaacggg
481 taacgatttt cgtgaataat actagcattc tagccttatt gaaagacaaa cgttcatatt
541 tttgtgatat atcttgttat cttctacatg atcgtctcga gatcatttta tttagatttt
601 tggacaaaga tgaggagata tctagtgatc tcaaagagat acatataagc gtatattgaa
661 acttgtggtt tcttatacat aaatgtacga tattgtaaat atttacgcat aatatggaat
721 cgtggttggg aaagttgctt tttaaaagta attatcgtca ttagtaatgg taactaattc
781 taaaaagtag cttattggca ttgttactta aaaaataacg atatgttact ttttccatta
841 ctctttgtag aatgttagaa caagatcata caagattaca cattttactt ttttaatgtt
901 tttgctcatt tttgcaaata attttttttt cttttttttt ttta
//