LOCUS LJ588203 1286 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57640.graph_c0_seq1.
ACCESSION LJ588203
VERSION LJ588203.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1286)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1286
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57640.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 415 a 239 c 255 g 377 t
ORIGIN
1 gatttgacga ttatatttct ttgaagcgca cgcacgtgcg aaagatttca tcgcaagttc
61 aagaataaga acgatcgctt atgactcata gcgaactcaa aaatgcgtta aattttgaat
121 ttttatattt acaccatcga gataatttca gcgcgttcga aaacacatga tagacaataa
181 agaagatgca agtatcaaaa atgatcgcgc gattctctct ttacgttttc cgcgactaac
241 gatctggatt tctttgagga acgcattaaa ttgtttgtac gtatcggtgt tgagaaattt
301 cgttatataa atgcaccgac tgcgtaatac ttaactatac gggtccgcgt acagatattt
361 tagtgttaca ttatggctgt aaatatgtca actatgacga taacgccgtc gtaataacga
421 atataactca gttgtaagaa aggccaacgt aaaagcagct agtttatgta cgaataaata
481 aattatcgtt cgcagaaacg cgtatgcgac gagtctgtaa gcgaatattt gcttctgaga
541 ttaaaacgga gctactctta tatcaaaagg taactgcttg atgtcaccgc gccgtatatc
601 tgcgggaagc cacagaccat tcacgaagac gggcttttcc gcaaaaatct tgtctaatct
661 gtacgttttc tgtcttttcg cgaagcagaa agttgcctga gtcatatctt ttactttgta
721 cgtgacgcat atgtaagatc tttggaagaa gaccatgaga aaatattttt caacatattt
781 acgaagcgct tgaatataga atatctatct ttttgctatg tcttttctgt gatttaaggt
841 acgttctacg cgaccattat gaaacaagga gtataattag ttgaattttt caacgtaatt
901 gtgacttggg ccactttcat catcacaaat atcgtagacg atgtcgaagc tcgcggagcg
961 aactttacga gcgatttttc cccccagtgc gcgtctctac ttaaggacaa ttatatcaaa
1021 gtaaatcaaa agctcgcgat atcacatatt acttgctaag tttcacaaaa gaaaaagaat
1081 cttcgacaga ggagaatcgc ttcccgtgac acggttcgta gcatttcatc atgaccaagc
1141 gcgttgcaac gcaacgtttc atttgatgaa tggcgaaaga catatcaccg gccgcgaatg
1201 acaattcttc gaagtttgca tgttttcggt gatgaatatt gcgcgaaaat aaagagaaag
1261 atgataggga aaaaaaaaaa aaaaaa
//