LOCUS LJ587745 1685 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57888.graph_c0_seq2.
ACCESSION LJ587745
VERSION LJ587745.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1685)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1685
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57888.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 641 a 199 c 227 g 618 t
ORIGIN
1 ttttgcgttg ataccacaac gcaaaaaacc ttctcaatcg taatgctaat tccaagagct
61 ctttacaaag cgcgtttgta taactatggt ctttatagtc gtttcatacg agtcttactt
121 aaatgtgacg caaaaaaaat gcgatctttc tcgtataaaa caaacgacga agttccttga
181 aaatatcatt ggggttttta atatcgtggc atatattttt gctaagcagt acatcgatag
241 taacttattt cttgtaaatt ttatagcaat tttatttgta tgcttatccc aataatttta
301 atttgatgtg ctccaataat cccggacttg aatcaatgta cagatcaatg tacagtagaa
361 attttcaaat atttgcagtc aaagtcataa tcgatgatta attaaaaaat aaattcttaa
421 ttatatctca ttatatttaa ttataacgtt ataatttgaa aaaattagaa gttaaaattc
481 atatttttca taaaatttat attttcttcg aaaatatgaa gttgcttatt atttgaatcc
541 ttagacaata ttgcgaatta ttcgagaatg tttcattccc gattttgttg aatatctttt
601 attgtatctt ttattagtat aaaaataata tttaccaaaa tattcataaa aattaaaact
661 gcgttatatc aactgtcata atcctaaaga ttagttggca catactgtca attattaatt
721 ataaattttt tatatatgct attattatta ctattaataa tataaattca aactattttt
781 atatgttaaa agtaatataa caagaaaaat ttacaaatat acagttattc tatctattta
841 tatatgtact attatagtat acttttatat atgtatatta atagaataga gagtaaagat
901 gtatgtacga gcaacatctt taaagattat gacagctaaa aattttcaat tattaaattg
961 agaagaataa atacacatca ttgagtaaaa tatcacataa atatatcaat ttcattatga
1021 attcattatt tttttatatt taactttaat ttcgggtcta ttaatgatga attttcagaa
1081 gtttttgata ctgctgtaat cataaaattg ctgtagtaat gataaaattg ttgaactgaa
1141 agcctttaag aatatcacaa caaacagtga cattttgtaa tataaaaaat tgcaatccta
1201 cgaaaacaga tgttcacaga ttaccgagtt tatttgagat gtacctgact ttaagaacaa
1261 agtgtaggat gacttctgtt ttcggagaaa aaaaagagag agagattatc tctttccttt
1321 ttaagttaca gagtaccagt agagacgtta caatgtcaga agagcgtaat gtttaagttg
1381 tagatgtcat aatatatgtt gcaaatatta tatatttgaa aacccacatg tgggaccaat
1441 gatcttaatg tattatgtac cagagataga catatttttt gatgaggaag acgaaatatt
1501 atatatattc tcgagcgtta taccatttct tatgataatg gtgatgttat gaatgtaaag
1561 tgtatttaat ataatacaat aaaaaaattg tgtactatgg cgtattatcg ctatctcgca
1621 tgtagttata gaaagagaga gagaaaaggt caaaatataa tattatacaa aaaaaaaaaa
1681 aaaaa
//