LOCUS LJ587744 1472 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57888.graph_c0_seq1.
ACCESSION LJ587744
VERSION LJ587744.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1472)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1472
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57888.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 573 a 160 c 194 g 545 t
ORIGIN
1 tggtatcaac gcagagtaca tcgatagtaa cttatttctt gtaaatttta tagcaatttt
61 atttgtatgc ttatcccaat aattttaatt tgatgtgctc caataatccc ggacttgaat
121 caatgtacag atcaatgtac agtagaaatt ttcaaatatt tgcagtcaaa gtcataatcg
181 atgattaatt aaaaaataaa ttcttaatta tatctcatta tatttaatta taacgttata
241 atttgaaaaa attagaagtt aaaattcata tttttcataa aatttatatt ttcttcgaaa
301 atatgaagtt gcttattatt tgaatcctta gacaatattg cgaattattc gagaatgttt
361 cattcccgat tttgttgaat atcttttatt gtatctttta ttagtataaa aataatattt
421 accaaaatat tcataaaaat taaaactgcg ttatatcaac tgtcataatc ctaaagatta
481 gttggcacat actgtcaatt attaattata aattttttat atatgctatt attattacta
541 ttaataatat aaattcaaac tatttttata tgttaaaagt aatataacaa gaaaaattta
601 caaatataca gttattctat ctatttatat atgtactatt atagtatact tttatatatg
661 tatattaata gaatagagag taaagatgta tgtacgagca acatctttaa agattatgac
721 agctaaaaat tttcaattat taaattgaga agaataaata cacatcattg agtaaaatat
781 cacataaata tatcaatttc attatgaatt cattattttt ttatatttaa ctttaatttc
841 gggtctatta atgatgaatt ttcagaagtt tttgatactg ctgtaatcat aaaattgctg
901 tagtaatgat aaaattgttg aactgaaagc ctttaagaat atcacaacaa acagtgacat
961 tttgtaatat aaaaaattgc aatcctacga aaacagatgt tcacagatta ccgagtttat
1021 ttgagatgta cctgacttta agaacaaagt gtaggatgac ttctgttttc ggagaaaaaa
1081 aagagagaga gattatctct ttccttttta agttacagag taccagtaga gacgttacaa
1141 tgtcagaaga gcgtaatgtt taagttgtag atgtcataat atatgttgca aatattatat
1201 atttgaaaac ccacatgtgg gaccaatgat cttaatgtat tatgtaccag agatagacat
1261 attttttgat gaggaagacg aaatattata tatattctcg agcgttatac catttcttat
1321 gataatggtg atgttatgaa tgtaaagtgt atttaatata atacaataaa aaaattgtgt
1381 actatggcgt attatcgcta tctcgcatgt agttatagaa agagagagag aaaaggtcaa
1441 aatataatat tatacaaaaa aaaaaaaaaa aa
//