LOCUS LJ587088 983 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57234.graph_c0_seq3.
ACCESSION LJ587088
VERSION LJ587088.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 983)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..983
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57234.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 342 a 185 c 230 g 226 t
ORIGIN
1 ggcgcttcaa tatggctgac agcgaaggca cagtgatcat aataaacttg gaattttaga
61 attttcggca agccacgcgt gtgcggtgaa gacgaaaata ttcgccacga tgaatatgtc
121 cgtggagaag aagaagtatc cctcggcgat gccgataaat tggcacgcgc gagaagaacc
181 gtcgaggaag agccagaatc aattgacatc cacggggaag gattacaatt attacaaccg
241 ggccagaagt gactcgtcat tggtaccacc gatcagacaa acggcgtcga tttttaagca
301 accggtgacg atttacaaga cgcaggaagg aaaagtgaag gatattaaac acagcattca
361 agagaaacca aaacaggaag gagccgataa aactgacggc aaatttggct cccaagataa
421 gcctaagcag cttttctggg aaaagcgttt agaaggtttg cgagcctgcg atgctgatgg
481 ttatgaattt gatggaatgg acctgccaaa gaacttaaaa ccagtaggac catatatcac
541 ggaagaaact ttgcttcaaa gtgtggccac cgcattacac gtatctactc agccagtcac
601 gggacaaacg ggatcgaaaa tggctttgga gaagaatcct ggagtatttc ttaaccctga
661 tcaaccactt gtacaggcag tctcgatagc ggacgaggac ataaagaggc aagaagaccg
721 agtggctatt gcgagaaaaa agttacaaga cgccttacgt gctgttcaaa cttaaattac
781 agaaactttg tgcgtatcat ttgctcatct cttaatttta agttcgttat aaattattgc
841 caatttttgt aataaatgtt tttgtaaaaa aaagaaccag aaaaaaaagg tataaattcg
901 atggatattt aaagcacgag atcgactgat tttctcgaaa tatattttaa caaaacgaaa
961 taaagccgac agcgtgagag aaa
//