LOCUS LJ587087 929 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57234.graph_c0_seq2.
ACCESSION LJ587087
VERSION LJ587087.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 929)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..929
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57234.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 322 a 173 c 216 g 218 t
ORIGIN
1 ggcgcttcaa tatggctgac agcgaaggca cagtgatcat aataaacttg gaattttaga
61 attttcggca agccacgcgt gtgcggtgaa gacgaaaata ttcgccacga tgaatatgtc
121 cgtggagaag aagaagtatc cctcggcgat gccgataaat tggcacgcgc gagaagaacc
181 gtcgaggaag agccagaatc aattgacatc cacggggaag gattacaatt attacaaccg
241 ggccagaagt gactcgtcat tggtaccacc gatcagacaa acggcgtcga tttttaagca
301 accggtgacg atttacaaga cgcaggaagg aaaagtgaag gatattaaac acagcattca
361 agagaaacca aaacagcttt tctgggaaaa gcgtttagaa ggtttgcgag cctgcgatgc
421 tgatggttat gaatttgatg gaatggacct gccaaagaac ttaaaaccag taggaccata
481 tatcacggaa gaaactttgc ttcaaagtgt ggccaccgca ttacacgtat ctactcagcc
541 agtcacggga caaacgggat cgaaaatggc tttggagaag aatcctggag tatttcttaa
601 ccctgatcaa ccacttgtac aggcagtctc gatagcggac gaggacataa agaggcaaga
661 agaccgagtg gctattgcga gaaaaaagtt acaagacgcc ttacgtgctg ttcaaactta
721 aattacagaa actttgtgcg tatcatttgc tcatctctta attttaagtt cgttataaat
781 tattgccaat ttttgtaata aatgtttttg taaaaaaaag aaccagaaaa aaaaggtata
841 aattcgatgg atatttaaag cacgagatcg actgattttc tcgaaatata ttttaacaaa
901 acgaaataaa gccgacagcg tgagagaaa
//