LOCUS LJ587086 1128 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57234.graph_c0_seq1.
ACCESSION LJ587086
VERSION LJ587086.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1128
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57234.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 383 a 196 c 249 g 300 t
ORIGIN
1 ggaagcttca atatggccga tagtgaagct acaggactgt acaggaccat acaggacgaa
61 gacgattaca gtgtgtgtac tcgcggttgt gatattttcg gaaggtattc gcgcattgta
121 aagacaaaaa tagacaacaa tgaacatgtc cgtggagaag aagaagtacc cgtcggcgtt
181 accaatcaac tggcccgcga gggaggaacc gtcgagaaag agccagaatc agttggcatc
241 cacggggaag gttgattatt attacaaccg cagtgtcagg aacgacgcgt cgttagtgcc
301 accgatcagg cagacggcat cgatttttaa gcaaccggta acaatctaca aaacgcagga
361 ggggaaagtg aaggatatca aacacggcac acaagagaag ccaaagcagc ttttctggga
421 aaaacgtttg gaaggtctac gagcatgtga ttccgacggc tatgaatttg atgcgatgga
481 tctgccaaag aatttgaaac cagtgggacc atatatcacg gaagagacat tgctccaaag
541 tgtggccact gcattgcatg tatctactca accagttaca ggacaaacag gatcaaaaac
601 agctttagag aagaatcccg gcgtgtttct caatcctgat caaccacttg tacaggcggt
661 ttcgatagca gatgaggata taaggaggca agaagatcga gtggctgtcg cgagaaaaaa
721 attacaggat gctctacgcg ctcttcaaac ctaagttata gagattttat gcatattatc
781 acttgctcat tttttagttt taagttcgtt ataaattata tatcatacca cttttgtaat
841 aaatgttttt ataaaaaagg taagtgaaaa atggaaatct aattgaatat ttaaaaaata
901 atcattttct gatatgtatt ttaacaagat ctcttgcaac tgtataaaat tgacaacaca
961 agaaatttga tataactaaa tgctctttta gaacttcgat aagtttctat tataatttga
1021 aaatgacttg gtttgtagta ctaaaaagaa gtgacttggt ttgtcatctg tctaatattt
1081 cttgtgatgt gcaagaaatt gatcaataat gtgctcacga aaataaca
//