LOCUS LJ585408 1002 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c56774.graph_c0_seq1.
ACCESSION LJ585408
VERSION LJ585408.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1002)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1002
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c56774.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 311 a 240 c 270 g 181 t
ORIGIN
1 gcagcagcag cagcagcagc agcatcatca tcatcagcgg gaaacgcacg aacaccggga
61 gcgtgaacga cagtcttatc ttgttgaaaa ggagaaggat tcgagcgggc tgtcggattc
121 cagcaaaact atctcgagtc aggaggagga aaaaccgtcg aaggaggaac gggaggcgaa
181 gaagacgcgc gtgaagcaaa gcctgatgaa acgggcgcgc tcagtggcga tcttctcctt
241 aaagctgaag gaacgccgcg cgcgggaggc cgagcttaag gccaaggagg cggaaaggga
301 ggccaggtgg caacagccgc aatcatgcgt cggcggcgaa ctctcgtgta tccccataga
361 aaagcttatc tccgtggacg acatcgcggc catggaaatg cgccgaccga atcattagcc
421 gcttgttgag acgactctgt ctttctcaca cttttgtttc cactgctacg tagagagccg
481 ttcgcgtacc gcgacacgcg ggttttgcgc aaccggacgg tgagatcaca ttcttcgcgt
541 atggaatcgc gagacgaaaa gaaaaaaaaa acagatcccg acggccgcgt gcaggtgcgc
601 gttaccggac aagagaaaaa ggcgcacaaa tttacgagaa tcatcgcaga cacaaggatc
661 ctatagatga cattccgtag agactactcc cgatactccc tagacccaga gcatcgaacc
721 gcggccctaa ctcggttcgg ttgcggaacg gaacgatcac gcgtggcgta ccttcgaagg
781 gtctacgcga gtaataacaa cgttccgcga tgaggattga aaatcctcga atgcggattc
841 gcgcactttt ggacaacatt gcaaataaca tgaaacttta aagatgaacc acttttttga
901 aaaaaaaaag aaattttgct aatttgtggg ataatttcac agaacgggag attacagagt
961 aataaactct aacagaccga aacgcaaaaa aaaaaaaaaa aa
//