LOCUS LJ584846 2298 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c56596.graph_c0_seq1.
ACCESSION LJ584846
VERSION LJ584846.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2298)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2298
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c56596.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 815 a 373 c 400 g 710 t
ORIGIN
1 aggagagttt ggctatgacc ggtaccggga ccttgaagaa gggacacaat caccctcaag
61 tcatggagga gctaagggtc tgactctagg agaccgcgcg gccaaacaac taacatggcc
121 gcgaggaaat taggatcctg aaacaagcaa gcgtcagaga atcactgcga aatggagctc
181 tccattatca gtctgaccat ggacacaatc aggacgaact acagaagaga aatacaatca
241 ttaccaggtc acagagaagc tgagaatcag actctagcga ataccgaaaa ttttagatta
301 gaatcgtgaa atcgtcgagt gtcgggaaac cgagatgact tttcagaaga tttttcgtca
361 ttttcgttta gctataaacg gcgtcagaag aaaccgcaag agagagagag acgattaaaa
421 gagacaaagt ctgaaatcaa aacggaaatt ccgttttagg aataatgatt tccaatgata
481 ctcgacggaa aatggaacaa ttcttcaaga tttttcaagg cgaccgtgat attgtcgata
541 gataggaagt gataaaggat gaaaagtgaa tgaaggactt tcattgttac gtgaaaagta
601 tgtattagtg caggggcgta actgggattt tgatcccgga agccaactgc tggcctttat
661 atagagccag aaaaactcag ggtccgatcg tgttcgggcc aaacagctgt tgcttccatt
721 cgccatgccc ctgtattagt ggcaatgcca tactgttatc gttttctacc tttcgaattt
781 gcgaccaact gccgaaaatc acatagtctt cgatggatag acaaatctgt taaataggac
841 tcttcatcct ctcaagaaaa taattgaatt attttctttt tcacattctt attttatatt
901 tatatttttt ttcattttaa gattttaatt ttgttaataa aaattgtcat ttttatttat
961 atatatattt tttacaattt ttattgtaaa cattcattgt aataaattag taagtcattt
1021 tcttacgtac acaacattaa tgatcaaaat taataatgct tttttaatct gcttttatgt
1081 tatttgttgt tattcttcct tcttctccct ctttcattac ccttccacgt aatatagact
1141 gaaggctcga gctgatttga atcgtgccga cactgtcctc gttcttccga gtgatgatga
1201 ttatgacaat ggttcgattc gctgccacga cggtttattt ctatgacgtc gatcgttcaa
1261 atgctcaatt aaatacttaa cactttcttt ctctttctca cgtaactaaa tttttacaaa
1321 aaccaaattt atcactagca gcacgccaaa aattgacaga acaaagtttt gataatttcg
1381 taaaattatt gcaatattct gataattttt tacaaattaa aatacaaaat aaaactaaac
1441 agaaacaaat ttctgcctaa taaaaatttg ataaacttct gagaatgaaa gggttaaaag
1501 tgagcgatcg aaaattgaat aacttttttt taacatagga ataaaagaaa gtcgaatggg
1561 cgacacactc aacagtatac tgccaaacga tcgcgaatta aggaaacaat gcgaatcgtt
1621 gaatgaaaaa tctctcgtga taagttaaaa ttcgaagatg gaaagctgct acgatagaaa
1681 aaaaaacgtg tcgtttttaa tccattaata ttttgcaaaa atgagacaac tgcaaattta
1741 atcaatgtta ttttaaatat aaacgtgtcc aaaagaatta tatgcgaggc aggcattcgc
1801 ataaaaatta attgattgca aattacttta ttaaaaacta tttcaaaaaa ttattgtaca
1861 taaaaatttt attagatact attcattaat ttaattttac taatttcaca aatctcatat
1921 cattcgtcag ttttgtatca tttttaaaac tagcaagtaa caagaagaaa gaaggaagat
1981 taaatttcta gagttgtcct atttttaaag ggttaacaaa gattttttga atatctgaac
2041 agggcgactg ttaaaagaac ttttgaaatg caatttcgac tgtaaataaa ggttaattaa
2101 gtttaggtct gtcgctgatg cgctgttaac gagtgaagga taccgaaaaa ctcgggaata
2161 cctctgattg taataatatt gcacatcaac gagaaaaacg gtatgtcagc gtagtcggaa
2221 gcacactgga cgtaatttta aatttgtata taattgacat tacaataaac tatataataa
2281 attaaaaaaa aaaaaaaa
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