LOCUS LJ583810 5905 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c56037.graph_c0_seq1.
ACCESSION LJ583810
VERSION LJ583810.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5905)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5905
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c56037.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1951 a 904 c 1000 g 2050 t
ORIGIN
1 gagtacatgg ggtgcgactt gagaagatgc catcatccct gccccagacg gcgacgagtc
61 cgtcggagga gcagtatacg gaagtgacgg ttgtgccaag tacagttcag tgaggcgagg
121 agagagatgc actatcatct cagttctttc ctccttttcg tgacggtgat aattgccact
181 tgcgtagacg gacgaagtaa gtgttgcatc gtgaaattac aatatataaa ggcggtggtg
241 catataagaa actgggatgt tgtacgtttg aatataatcg cgacactctt gcgaatcgac
301 tgagttgagc gatgtttcac aatttcggac ggaaatccgt ttatcgagat atgagaagag
361 attaaaggga ctctcctgaa aggaggtgtt acatacttgc ttcgaaaata agactggatc
421 taaagtaaaa aagaagatca ttagtttggg atcaaatgaa ttattggaaa ttcatttcta
481 agctaaaaaa gttaaaatga actctaaatg aattcgtttg aagacttcct taaatggttc
541 tctgagaaaa gattttatgc acaaagcatc tatataaaag ataatagagt acacaagagg
601 tgcgactcgt tgaagccttt aaggaaattt tttaacaaag cgcattttct attccaagct
661 agtgattctt cttgtttgac tatgcttgta tatccagcgc gatatgcata tgcgtgcggc
721 acgatacgtt cgaatataac gagaaacatt agaatggcgt tctcgttcgt caaagtgtgt
781 accagtactg cgttactttt ttttatacta tatgcgcgat attactctat aagttaaaat
841 aagtcaatag attacacgaa tacatgatat atatatatac ataccgtata acggacatat
901 atatgtatgg ccggattgac ggacagcata ttgctgtcga aaaataatta aattaagtcc
961 acttcagacg atctataatt cagaattggg cgcaatctag agcccctggg aatccgacac
1021 tttaaaattt tttgcgcttt taacttgcgc atttatctca cagataataa tgatcttttg
1081 aatgatttat acatgatact atttgttaca atcattacga agttccagga aaaatgcatt
1141 acttctcttg tggaaaggta aatatatgca caacgtgaaa gagcagtgta tgaagttttt
1201 gtaaaaaaag agtgtggttg tttctcagaa ctttcaacga tgtctcgcaa taatcgtgat
1261 gcgaataata tttagcctaa tttaaagtct aattaaaaaa aattttttta aacttagagt
1321 aaaaagttta tatataatct ataattctat cttgagttat acaaagtata aaatgtttaa
1381 attgttatat atcttgttat acaattttcc tctcctatac tctttcctgg atccgtcaag
1441 gtagtgttat atttacaatt ttatgcaccg tgtaatagag gattgaagaa gaatcaatat
1501 tacacatatt ataaaaaaga aagatgaaaa aaatatgaac aaatacatcg aaatatacgg
1561 cataaagaaa ctaagtacat aacgcgccag tttccactcc aaaaaaatta tagatcgtct
1621 atagttggtt ttggttagat attttttcac agcacaactt tttcgctaaa ttctcgttta
1681 atcatgagaa atttcttttg ccatttttac aggggtaaac aaactttttt taggactata
1741 ttttctagat ttctttatta atgacacaga gatatcctcg tttaatcctt gattaatcgt
1801 tagatttagc caatgcaagt agttgcatta aactctacaa cttcacattt tttactagct
1861 cacttaatta gaaattaatt aaattagcga cttaaatgat gctactctgg tataataccg
1921 agaatagggg aaaaaaacag aagaaaaaat attgtatatc acgcaaattt gcaatcttct
1981 ttgatacaca tagcacatga ttaattaagg attaacattg tttcgtaata acgattctca
2041 aacgctattg cgttttatat cgtgttgatg gcaacaagtg catacagata ttcttttgac
2101 cgagtctctt gataatttta tcaataaaaa tttcgcagaa acgtgctcac aaatatttcc
2161 gtttcatata tttgcgcgac gggattgctc aaagagaaac aaaaataaca tgttcgatga
2221 aattactgcg tacaattgca aacaacgaca agagcaaatt gcgttgattt tctatctttc
2281 ggagatgtat catgagcctg ccgaaattgt tctcttttta gtcgcaacag ttaaattatg
2341 caatataatt tgttatccgt ttatgcagct tattcgcgaa ttgtcgcgaa tatctcattg
2401 tcgcgcaaat cgatcgcgag taaaattgta tacgtggcga ggtaacgggc tttttttata
2461 ataatgttac agtgtacaat gtacagtgta actgcgcaca aggacagggt cagggataat
2521 aaggtaaaag gagataaaaa aagaaaaata tcgtggtgag cgcaccatgg gcgtcgccaa
2581 gcggaaaaaa acagacgaga aaaaacagtt ctgaacaacg aggatgggga aacttgacac
2641 tgcgtcatta acgtattacg aattaatatt attaatattg tattgcaata ttaaaatgtt
2701 ttatttttgt ccccgttttt ttaacttaca aatgttttag ttttaaacag tgtttaaaac
2761 actgaaacat ttaaagttat caaagatttt agctttaaat gttttagtgt ttttaaattt
2821 atccattatt taaaactaaa acatttttaa tatcttataa ttaaacactt ctcttgtaag
2881 tatagttgtt ccattttaat tttagatata taacattatg aatgttattt gaagtacatg
2941 gttatcgatc tgaagtatat aatatatcat gagaaatact tctttataat atatcatctt
3001 catgagaggt taaactgcgt gaacgactga atcactataa aaagatgcaa gagaagttta
3061 gtaagataca ttgcctgcag gttcttatag gaaaattaat atttcttcca tattctcgtg
3121 gtatattatt taaacaggta gcaaatgtgt taagccataa taataaaacg tttattatta
3181 tgaattctgg catacacagc ttgttgacta tatttatgaa tgtctgcgtt aataatcgat
3241 gaaatcagta gagtagccgt gcactaagtg gtcgcgctta cgacgcagtt ttacgatgcg
3301 ttattatcag tactatagat atatattcat ttgtgaattc tatttagaaa atctatcgcg
3361 ttatggacaa tgcttaaaca cagtataagc tcgagatata aaacacgaat tacttatatc
3421 gcagaattga aaataatttt caagatatgt ttctataaga gatatattgg ttttgcagtt
3481 gtaattcatg taaaatgaag gtgatttctg taaaacacat taaacgttta taagattgct
3541 atgactatat aaatattttt acaaaacgca attgaattga aaagaggtta cgcagaatat
3601 tgatttaaaa aaagttttgg tatgttttga cattccatat aagagacttg cttatctctt
3661 ctgcatttct aatcataaat agaattacat actttaatat atatatataa tatgaataca
3721 gtatcgtatt taaatgtttt atgtaccagt tcattgccaa tttatcatgc atgaaagctg
3781 aaactgtaaa ccagaactgg aatagataag atattcgtga ctaaatacaa ttttaccatt
3841 agtttatttt gatgtattgt cacacgtaaa taaaaagaaa tcgtttttat tttgtttttc
3901 attttttatt acacgcgtac ggcattcatt gtcgacattc agagatatac tctgatattc
3961 atagtcttat atactttaat cttaaatact gcctaaatct ctaatattta tgaaatgagt
4021 ctctaaattc aatttagaat attttataat aaaaattgga cctcagattc taatggcata
4081 cgaaaaaaat aaaaatttta tagtttgttt catgtgatag attgattcat gtgatcatta
4141 ttatttatta aataatgtcg aaattaagat ggcacattaa atatatatta ttttgtagaa
4201 tgattttgat attgacgaac aattagatgt acacaaaaat actgcattgt attttcgaat
4261 ttaaaatagt tgaactattc aatactcaca tgaaaaaaac ttattaaatt ttttttataa
4321 atcaaccgag atgaagaaaa tatgtatgta ttaatgtatg catagatcac tgagttatgg
4381 accgagtgcc tgaatatttt taatccattt catatcagtt acgtattctt gcttgtatta
4441 tcagctcaat aaacactcaa atgtataaac atgcggtgcg tacacgccgt tttaaatgta
4501 tccgtagata tgtagtttaa acactggtgg caataaatag tatattagtt agttccacca
4561 cattttcaag tggggatgga aatgcagaat gtcttgttga taattgatta atttctgtta
4621 attccgacga caacgcgtaa ttttatatgc gtgaacattt aaattttatt atagaattac
4681 acgattcacg tttcgtgtga ttatagttaa gttcctatag tcactatatt tctatcttca
4741 tgagtttgag aagtttcctt agctttatag ctttaagaaa tcaaatttgt aaaactgtac
4801 gcgaattaat tgtaaagtct gacgaaaaaa taaacgatac atatgaatgt cagtattggc
4861 aattgtaatg aatattatgc ttcttgaagt ttttatcaaa gcaaaaaatg gttatacaaa
4921 agccttttat tatttcaatc tttgaagttt attttacaaa aattgtttac tttttatcca
4981 tatatcaatt tgtcaaatta attattaata aagatttatc aatttatttt attttatgct
5041 ttgcatacag aacatcatat ataattgtgt ataaaaaaat actaacgtag tcttaatcaa
5101 attacatttg tatgcatcaa gtcagctatg gctttttgtc tgagagtgta gagctttttt
5161 acccatttgt cgaatcttgc ttcttgatcc atcataatcg atgtgtgaaa tatgctttct
5221 gagccactag caacgttaga tactggtgga atctgtatgg tatccgaact aatgtctatt
5281 acaatatttt tcaatttatt ttctttggta gcagacgaag taaacgtctt aggcgtgaaa
5341 ccctcagcgt ttatctcatc aagcacaccc tctttgaaac gtggttcaat aggaaaatca
5401 tcttttacta gaacttgact tttctctgta ttaatttttt gttgattcga ttgcgagctg
5461 ctagaaggac ttcgtgactt ctctctggat gtggatctag cttttcttct tgtacgatct
5521 gaagagtacg atctgccagt gctggaacga taacgcctct tatctcgatc tctcgaatga
5581 ctacttctgg atcctttatg gctctttaaa ttccgatctc ttcccctgct tctcgagtgt
5641 gaacggtgtt tgcgttttgt tttcgaatgt tttgatgatc ttctccgatg cggcgaggat
5701 tcgctactat ctgagctgct agatctcgac tttcgattcc tctttcttcg gtatctgctg
5761 ctgtgatccg agtccgattc actggaatat ctcgccatgg atgtcaaagt agcctttttt
5821 acttatctag gaatcagcac gacccaacca gacccaacaa tcagaggata gctccagata
5881 gttcccccca tgtactctgc gttga
//