LOCUS LJ583006 1311 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55786.graph_c1_seq1.
ACCESSION LJ583006
VERSION LJ583006.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1311)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1311
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55786.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 462 a 228 c 172 g 449 t
ORIGIN
1 ttcataaaac aaaaacatta gatatttttt ttctttaatc tttcaataaa agtaaagatt
61 cgctaagaaa ataaatgtac ggtacccagt cgacgtgaaa gaagcaaatt aattactttc
121 aattttatat ttaattatcg atttaatggt cgatcaatag gaacattgtg aaaaggtaga
181 cttgaaagag cgcaatgctg gagaatgagg ttcctttcgt gccagtttta cgaatattac
241 aatgaaacag aaaagaatct tttaaataaa ttaatctttt aaagaggacc aaaaactcgc
301 gcgtcgctat ttactttctc aatcaacaca accgagctta aacaatcaaa tcatttctca
361 gtacattaca aacaattccg gaaatgctct atcatcgcga ttaacagata caatattaac
421 acttgaccaa tttcccagta tcttgttgtt tcttcataga tgtgtgtaag cactgtaatt
481 tgtaattctt tgcacgctat gttgaaaatt tgaatatttt tataaccatt ttaataaatc
541 tatgcattcg gtactcgatg gcaactacga ttgcttcaaa ataactttaa ccaaattccg
601 attgacttaa tcggtaatta attcaaacaa caggattatt tgcagcaaag tttctacaac
661 tgcacaattt gttcatccta atccaatctt ctctttcatt catcaaacaa ttagtagtcc
721 atattaattt tatccgtata cattgtgtaa caaataattt tacaatattc aatcaccaat
781 taaattaatc ggagtttggt catccttgat gaaggaagca cttaaactca cacttgataa
841 tagcgatcct ctacttttcc tcacccacgc gtcacagttc tctccgtgta cctagactta
901 ttgttaattg aaactgcgac gtctgttact gtatagtcct tggtttgctg taacagattg
961 tatttattgt acttctgatg tatacagaat ctatatcttc ttctcctatt gtaaatttaa
1021 tgaatattgt agtttataga cttaaccggc gaccaacttg tttatctttc actacactat
1081 caagggacgc aagagatgat attcgttttt ttttttttta attataaaga gaatctatat
1141 cttgcgatat attacgtctg aaaataaaca tcaaaagaca aaaacgaatg ctgatattac
1201 cgagtactct tcgtaaataa gaaattcatt ataaatgtat tacactacat aagtctcgct
1261 attaaaagat tattaaagaa accttatact ttaaaaaaaa aaaaaaaaaa a
//