LOCUS LJ583005 1086 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55786.graph_c0_seq2.
ACCESSION LJ583005
VERSION LJ583005.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1086)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1086
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55786.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 355 a 191 c 151 g 389 t
ORIGIN
1 cttaacccct tcgtccgagc aaaacgagga ccttcgtttc tcccaaagag aacagaaaag
61 tcaaattacg tcaatttggc gtcaaattga tcaaatttac tccatcttct ggccatgttg
121 accaaataat gacataaatt cgataaattt gatgtctaat tgttattgac tcttttgttc
181 tacttgggat gcaatgtgac tataatatac gacgcttttg ttaacgtaca atttacatac
241 gttgcttatc gcggcaaact gttctcttta ttaatccaca acgttactta catttcgtta
301 ccgtaattgt taaactaatc tcgaaaatta cgcgatgcgg acgcgagcgt gcgagcgatt
361 caatgagggt acggcgatac ggtgcgaagt gaggcacgcg acgaccgcca atcaaattcc
421 gattaactct ctgtgacgca tacacctgtt tgaaattcgt ttttataaaa tcgttcatac
481 atttaaaaaa aatggaaatg tcatctctcg ttaatttctt ttctatctcg aaatataaac
541 ttcttttaat cccaattaat ttcttaaaca gagaattccc tggcattaca ttcactttgt
601 gattcaagta ctttctgtta ttgaaataac tgttgaaaga gagataattt aatttatcgc
661 gtattgaaat tatctctctt tctttgtttc tctctcactt tctcgtacac atttagatat
721 tattttaatt aaattaaaat aattgtaata ttatattaat acacttgtac gcaatttcta
781 tactctgtac attatctttt taaagcgcat tttctataat taatctattc tttctataat
841 taaagcaaac atagattaaa tttttggaaa gaaaaagaaa aaattatcat tgttaaacaa
901 ggcagaactt ctgccaattt ttcatgttct tcatcgcatt agttcgagtg aacattaacg
961 actattttta ccgttctgaa gaattacgtg atgatgatat caaatgagct gaatcaacaa
1021 aatatattaa tttttaattc gcaattagat taattaagga ttaaatttac atatttctaa
1081 aacaaa
//