LOCUS LJ582486 1933 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54228.graph_c1_seq1.
ACCESSION LJ582486
VERSION LJ582486.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1933)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1933
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54228.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 634 a 319 c 387 g 593 t
ORIGIN
1 attgcagtgg tatcaacgca gtctgggtta tgacgatgaa gttgtttgcc gatatggagc
61 gaagaagacg ggaattggcc acgagagacg cagaacagcg caagagaaag cgcgaagagg
121 aattatcagc agaagctcag gcggcgttag agcgcgaatg gcaacgaaac tttgaagaat
181 ctagacaatc acgtgtcgat agctggaaag cgtttcagtc cggtactagt gctacaaagc
241 agaaaaaggc gaagaagctg aaggccttca ggccaccgaa gacgaaggcg gaatcgcgat
301 aatcgcagtc gtaccctttc cttcactttt gacgtgcgga ttttggtttt agtcgacgcg
361 atattttatc ttagagattt tctcgcagcg cgttaacgta gatcgttaag cgatccagca
421 cagcgcgata ttaatccagc aatcgaccaa cgcgctggat cacttcaact tggaaagaag
481 tgaaagaaag aaagatattg gacttcggcc ctttttgatt ccaaaccatt cagttcagtg
541 caaggtaaaa gtttttcaaa tttggccatt attaatttaa tgagagagag agtttttaag
601 agattcttgc actaatcatc aatttcatta atctattaag gataatttat tatatttttg
661 ataagaatac atctctttat ttcacataga ggattatcgc tgaagcttct tgaatcattt
721 atatttttta tgaatttcaa tttaacattg ttaatatagt atataacgaa ttttgaagga
781 gtttggtgaa attgatcgca agtccacttt cttagataat cgtgatttga agccagaaag
841 aaggttttaa atgttggtgt tacgagtaaa accagtgtta agagcagata catatttttg
901 cgagaaagaa aagatatata gaaagagaac acaagctatt ggatgaatag gaaacgcgtc
961 tctttataac acaccgtgta tatgcaagtt gaaaataagt ttcgtgtgcg tatcgcagtc
1021 ttacagtgaa aaatggcgcc gttcgttttg gaaacaatgt aaattgcaca tcaaataatt
1081 tcactagaac gaacaaaatt ctcagcacta atttaaattt attcttaaat tcaagcattt
1141 aaatttgaat tttatttaaa tttttttcgt ttacatcgca ttcaaagtgc acggttcgat
1201 tcattttgca tctaagactc gcgtctcctc gcaaaattaa tgattaagga gttttctcgc
1261 gaattccgtg attacgcggc attcacgatt aacatgtgta aaaagaggag gtaaagaaag
1321 aaaagaaaaa tttctccgga gcattgtaca ttcgcaatat cctgatgtca ttgcgtgaca
1381 aatgtcaatt ttataatcta cgtgtgtctc gtgcttttac tattaaacgt acgatcgtcc
1441 atcgtaagga aagtacagtt gagtttatat tatcgtgatg aatttagaat cagggaattt
1501 tgatgatacc atgtttcgga cgcgataaac ggcaagatcg cgcgaattaa tatttaagat
1561 ggaaattgtt atgaaagatc gcatacagat ttcaatattt atcgtagcag aatctgattg
1621 aatctaagat tcaacaattc aaattttgga attttcaaag tatcgtaaat tcataactaa
1681 atctttatac tattcttttc tttatactat tagagaaacg attctctccg cattattgca
1741 agggactcga ttctgcactg aataagatct cgaattatcg tgatgccatt tgaatttaag
1801 ctccactatt caagatatac gataactcgt ttatcacttc atgaacacct cgatattata
1861 cgaacagtgt acgattgcga agattcatcg agaatgaaaa tagtgcgttc gagctttgaa
1921 atcaactgtg aaa
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