LOCUS LJ582099 940 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54547.graph_c1_seq1.
ACCESSION LJ582099
VERSION LJ582099.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 940)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..940
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54547.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 354 a 136 c 122 g 328 t
ORIGIN
1 tgtacaaagt ggtacataca tataatacga aacaaaaaca tttttattaa tagatataaa
61 ttattttaac atatacaatg taattgtcgt gtattctgcg aatcggagat caaattatgt
121 gcctcggcgg tttattttag ccttattttt ctcgaatcag cgatttcaag gaatacaaat
181 tattataaac aattatgaat atcttgatac ctgcaacgga atgtattttt tattaaatat
241 ttaataacga ttttgtaatt gacgtacaaa tattaacgcc attaatattt gaacgagaat
301 tatatattga taaatccgcg tatcgaagta cacaaaaata ttactcgata atttcttatt
361 aatgtatatt aatgtaaata atcacaaata attttttctt tattgcgctg tatataagaa
421 agttattttc gcaatcattc acacactgta atatcaaatc tactcactga taaaagttaa
481 cgtagaatgg tatatagaag ttagataaat aggatataaa tatgtgtata taactgcagt
541 tatgtattct caaatagtcg aaactgttgt atacaagaaa ctttcacaat tcggattagt
601 ccgagaaaga attccacaaa aatcttccac aagatttatt cataccaaat agtcaatgta
661 tcaagatgta aatatgtatc tcttttttta atattggaca ataaattaca gcagaatgtc
721 atgttattta gaattcttat attaaacaag aaattatatt taaacttgtt tacataaata
781 aatcgacatg taataaaaag tgttgcactt ttaaatgtaa ggtttacaaa gagtcactgt
841 atgatccact ccacaggcaa cttttcttac ttgagctcct actgctaccc tcaaagggaa
901 aaattgatcc ttcatgtgtc ctaatcccaa agatccaaat
//