LOCUS LJ581618 1348 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54464.graph_c0_seq1.
ACCESSION LJ581618
VERSION LJ581618.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1348)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1348
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54464.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 414 a 228 c 281 g 425 t
ORIGIN
1 ggggtttcgc aattcgcgta ttctcgcctc ctgcgatgtg tcaagtcgcc tctcagtccc
61 gcacctgcag ccgcgtttta ggaaccggga gattcgcgat tgtatagcgg tagcgcgacg
121 gtctcctttc gcctcgtctt gtcttgtccc gtctctcggc tcggtgtgtg gcaaagtgcg
181 cgccgcttac gtcaacgttc atcaatccgg aaaagaaatg gaggacgttt tgaacgaggt
241 cgtctcttcc gaggatttga agaaattcga aactgtatac aatgagcagt tgcacacgtc
301 gtacgttacg caaaaagccc aatttgaata tgcctggtgc ctcgtgagga gtaaatactc
361 ggcagacatt cggaaaggaa tattgctgct ggaggacctc tatagcaatc acgatacgga
421 aaagcgcgat tgcctgtact atttggccat tggaaatgcc agaataaagg aatactccaa
481 ggcactgtca tatgtcaggg cattccttca gatcgagcct gcgaacgtgc aagtacaaaa
541 tctggaatcg ttgataagga agaagatgga aaaagagggc cttatgggta tggctgttgc
601 gggaggtgtt attatcggtg tcgcaagtat tctaggcctg ggtattgcga tggcaaaaaa
661 acattagtta cccctaaaag aattattaga actgtgacta tacaattaca tttgtgattt
721 aatttatttg cgcgaaatgg tgtgtaatgt gcgtcataat tgccgtttga gacagtgacg
781 agtctcaaat gtattagaac gttgaccaaa tctaataaat tataattttt aacgttattt
841 ttctatttat cacgaaaaaa agggagaaca aggaagaaaa tatagggctt ataaatacga
901 ttctttaatt agttatatta tttatagaat aatttatgcc gttttaaaca cctcgcataa
961 aatgtgatct tctttatgct tcccaaaagt atctgtttaa tagtcaagtc aatttaattt
1021 tcaatatccg tttgttgtat gcgattattt ttttttacat tccaaagtta caggcgatta
1081 tttttcacat tgtatatgtc acgcataata ttacatagac atgtatatat cagtaaatca
1141 ttatagatat atgtatatcg taatgattta tatttaaaat catgtttaat cgaagcgtac
1201 caaagctata aataaaatta cagaataata agtattatag cttttgtata taattagggt
1261 tatatttaca gttgtatacg cgggtttgtg ttattactgg atccttttaa taaaagtcat
1321 tgtttgaagc taaaaaaaaa aaaaaaaa
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