LOCUS LJ580493 2926 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53947.graph_c0_seq2.
ACCESSION LJ580493
VERSION LJ580493.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2926)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2926
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53947.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1069 a 549 c 531 g 777 t
ORIGIN
1 ccactttcac aggtttctcc atttctctct gctttcagtg catttggcca tttggctttt
61 aataaaacga catctgacga tatccaacga tatctagcag cagtggtgag cagtggtgag
121 tgtggtgacg tctgcggtgt tgtttcgcgc caacgagata aaaaggcggg cttttggtta
181 ataacctgtg cgtttctgcg atcggtagac ataaaagact atgtcgcagc catcagtaac
241 ggcgtacttt aatacgcgca aacgacaggc gtgtgacgaa ttacgcggca aatccaagat
301 tttactgtta gagcgggata accaagcgca gacaacaact accatcgaga gcaagtcggc
361 ggagcaatcc gcgtctgacg agacaagtct gacgggaagc agtccgaaaa tcatgttgcg
421 gaatgataac gcaaatttca aggacggtat tcgggccaac aaagcgatcc gcaatattca
481 attcgattct tcgaaagtga gtagacccaa aatgcgagcc actcgctctc gtacattgcc
541 ctccaccatt gacgaaagcc agacagacat cagagagagc ttttcaaaag tggccaatga
601 tccagagatc aagaaagttc ctttcgagaa gataggtaca cttagtccga aaaagaagtc
661 gcaacagata cccaagaagg cttctgccgc tatttccaaa gatatcgtcc aaaaagaaac
721 agaaaaggaa caacctgtca acatacttgg ttctctcact ccaccatcgt caaagctttc
781 aacgatggaa agacttgcaa gaaatgaaga cttaagtttg actgacatca aaaacagaat
841 caacaagtcg tccagattga cagagctgaa agccataatg cgacgaatca ccaatcacga
901 acaaacattg gagcaattac aaaaacagac tgagattgag aaacctcaga tgcaaaagtt
961 tgataaggtg gaacttgaaa ttcctgtgag cccacaaaag acgtataaat ctccaactaa
1021 aggattactg actccaacca aggataaaaa tctctccaag atagctagtc ctcaaaggcg
1081 aattttgttc gagcctaagg agacaacgcc aagtccaggg aaatccagtc ctgttaaggc
1141 atatcaaaaa tatctgtctc tggctgaaag cgagatacct ggattggcat taccatataa
1201 ctatagattt ttggctgaga tattcagatg tgtagatacg gtttcagcaa tgctatttaa
1261 tagaaaagaa ttgataacat tcaataaact aaaacctgca gttcaagaat tattacgtcg
1321 taatttcaca caagagcatc tagctcaaat caaaactatt taccctgatg gttatactta
1381 tcatcaagaa aagcatcgaa attttggttc aatgtccaag caagaaaaat atgaattagt
1441 tctaacacct gtagttgaag aaattaatgg cagaaataca cctgatgcag ataacgtatt
1501 gaaaactgca tctgaaaaca gtatgaaccc tacaatatta ttggaaagaa ggaagaaatt
1561 ttataatgct ttattagaaa gagtgaagag tgaacacgag aaatttttgt caagccttgg
1621 gactccgaga ttaatgaata taccaagaga gaaaatagta cgctggcatc ccgagtttga
1681 tgtagagtct tgcgagaaaa ttgagcaagc tgtattacca caaccacctc acgttgaaaa
1741 accaactgct aaagatgttc ttgacaaagc taaatctctg tttaattgtg gtacacgtat
1801 ggagaaagca ttgcaaagac ttgccgaagc aaatctaact tccaaatctt catctttgac
1861 acaagattct gcaacccaaa caacagagaa taatgttcca aagattaaca ttgctattgt
1921 agacactccc ccaagtacac catccatgca aacaaatcat ctgagtacac tatttaaagg
1981 tatccccaaa gctttacttg aaaaggttcg tgctaaacaa acggccaagg cattagaagc
2041 aatgacgaga acaccaaatg cagataaaga ggctgcatta tactccagac ttcccgaatt
2101 agcgaaactt cttcgcaata tcttcgtggc agaaaaaaag agcgttttac caatggaatc
2161 agtgatacaa aaattaaata attccttcag aacgaaacta acatcgcaag aaatggagga
2221 gcacatacga caattgtgca agctgttacc tacatggacc aatatacata acgtacgaaa
2281 agtggattat ttgaaattag ataaaaacgt tgaacttgct aaagtgatta aacgattaga
2341 aattttagcc aatgataaag tgaagacaac atcctaattt gtacgttccg ataaattata
2401 ttttggatat ctgcattttc acctaatagt gaaactatta tgctgttcaa atcagaaaca
2461 tttgattttg catatttaca catttctata tcgtgataaa aagaggattg tataatgtat
2521 cttattatat ataatttatg acaccaccat ttgttcttca cacttcgcag aacattttta
2581 gtaaatatga aactctgaag tatgaaataa aatgtaacaa atgggaatat atgcaacatt
2641 ttacattttt tcctatttta taatagagat tataattatt ttattttatt ataatgattt
2701 gaagaattgt ttatacaatg atattatcaa tatgaataat attatatgtg atacgaaact
2761 attttcagag aaatatcaat gcaaatttgt aacttcagga atcggaattg aatcatacat
2821 aagaaatttt ctaaatttct tgagcaaaac tgctgacaac ctatatgcat tatttttgac
2881 acgtttatta ataaagctat taaaaaacgc aaaaaaaaaa aaaaaa
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