LOCUS LJ580492 1323 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53947.graph_c0_seq1.
ACCESSION LJ580492
VERSION LJ580492.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1323)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1323
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53947.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 508 a 213 c 192 g 410 t
ORIGIN
1 gagtataaag gtattgctca ctgttgcgcg caatacttga tcagttacat tgtgcagtct
61 cgcattatgc actattcaac tcgattctca attaataaat taatttttga aaatggattt
121 aaaatatcac ttcaaagaga tcaagctatt tataggatat acaaagctaa atctctgttt
181 aattgtggta cacgtatgga gaaagcattg caaagacttg ccgaagcaaa tctaacttcc
241 aaatcttcat ctttgacaca agattctgca acccaaacaa cagagaataa tgttccaaag
301 attaacattg ctattgtaga cactccccca agtacaccat ccatgcaaac aaatcatctg
361 agtacactat ttaaaggtat ccccaaagct ttacttgaaa aggttcgtgc taaacaaacg
421 gccaaggcat tagaagcaat gacgagaaca ccaaatgcag ataaagaggc tgcattatac
481 tccagacttc ccgaattagc gaaacttctt cgcaatatct tcgtggcaga aaaaaagagc
541 gttttaccaa tggaatcagt gatacaaaaa ttaaataatt ccttcagaac gaaactaaca
601 tcgcaagaaa tggaggagca catacgacaa ttgtgcaagc tgttacctac atggaccaat
661 atacataacg tacgaaaagt ggattatttg aaattagata aaaacgttga acttgctaaa
721 gtgattaaac gattagaaat tttagccaat gataaagtga agacaacatc ctaatttgta
781 cgttccgata aattatattt tggatatctg cattttcacc taatagtgaa actattatgc
841 tgttcaaatc agaaacattt gattttgcat atttacacat ttctatatcg tgataaaaag
901 aggattgtat aatgtatctt attatatata atttatgaca ccaccatttg ttcttcacac
961 ttcgcagaac atttttagta aatatgaaac tctgaagtat gaaataaaat gtaacaaatg
1021 ggaatatatg caacatttta cattttttcc tattttataa tagagattat aattatttta
1081 ttttattata atgatttgaa gaattgttta tacaatgata ttatcaatat gaataatatt
1141 atatgtgata cgaaactatt ttcagagaaa tatcaatgca aatttgtaac ttcaggaatc
1201 ggaattgaat catacataag aaattttcta aatttcttga gcaaaactgc tgacaaccta
1261 tatgcattat ttttgacacg tttattaata aagctattaa aaaacgcaaa aaaaaaaaaa
1321 aaa
//