LOCUS LJ580217 996 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53763.graph_c1_seq2.
ACCESSION LJ580217
VERSION LJ580217.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 996)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..996
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53763.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 363 a 127 c 142 g 364 t
ORIGIN
1 ggataattaa agatagctgt gttagaataa ttggatattt atacgaatga tcaatcattt
61 aatacaataa ccatgacatt cgtatatttt tttataatca taaaacattc ctaaaaggtt
121 attctaattg tactgtactc tttgcttatt ttagtgcaaa aagttttgct agtgcaatat
181 attactcaat tatttacgat actttacaat atattaaaca acatggctgc ggaagatctc
241 aattaaaaat ttaataatag atcttcagca gtcgtcttgc attaattatt atcaaactgc
301 cattatgcaa cttttagtca gcaatagtta tgatagttgt aatgattgac gaatgtgaat
361 ataatcttgc aatggattaa gtacaagaac aaatttttat ttgtatataa aattggagat
421 tatttacttt tgctgatatc aagtaattct attcttcaaa ttcttagctt tcgttactaa
481 atataagacc aaaaatatat acataaaaaa aacattaaag taaataattc ccaattttta
541 taaaattatt attcagtatc tttttccaat tagtagtatc tgatattggg gatggttgcg
601 ggacttgtat gcaatattct gtgactgtat aacgcgatat accatttctt atatttatta
661 actgaattta atatctcgca taggaaatat ccatcaaaga cagcacatca ttaaaaaaat
721 gtagaatact aattgtggca gctagttttt ttgtaggata tattagacat gataaggcgc
781 aaaatgtaca cgcgttttgt acataccttg acaagtagtc tctcatggga aaccaatgct
841 ttttcacgag ggttttaata catacatcat gacgatattt atgaataaat taggataatt
901 aatatttgtt cacttaattg tgtcgtttgt gtgtttgtag ctgatctctg caataaaata
961 tgtattaata aatagcgtga aaaaaaaaaa aaaaaa
//