LOCUS LJ579167 1174 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53201.graph_c1_seq2.
ACCESSION LJ579167
VERSION LJ579167.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1174)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1174
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53201.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 397 a 201 c 261 g 315 t
ORIGIN
1 acgcagtaca tggggagtct cactctcagc ttcgttctag ttagatctgc ggaaatgagg
61 gaagcttgtc tcaattgaaa gttgatcgtt taccgaacaa gttttattta taacaagcag
121 ggatgaacgt aatgagatac ctgctccatt ccatcgggaa agagccaagt tgaaggatac
181 cattataaat acataagagg aaacacctag cgagtgggtg attacgatgc aagcggataa
241 gagcaatact aatactgatg ctctcaacga cgtgacttca gttgcgaatg aggtaacaaa
301 tttgaagatg gaagacggtt caacgacttt aaccccaagt agtcctggca gcactgaacc
361 gggtagcttt ctagcgagct ttaaagcgtt ttctaaattt ggcgattcaa aaagcgatgg
421 caaactgatt acgttaagtc aaagtgacaa atggatgaag caggcaaaag tgattgatgg
481 aaaaaaaatt accaccacgg acacaggaat ttacttcaag aaacaaaaat caatgaaact
541 tggtcttgaa cagtacaaaa tgtttcttga agaattggcc aaaggtaaaa aagtggaatt
601 agcagaaata aaaagaaaaa tggcaaattg tggaccacct gggtttactg gaggcgctgg
661 tgcagctggc aaagcggcat caacagttga caggcttacc gatgttacta aatataccgg
721 ctcccataag caacgttttg acgagacagg aaaaggtaaa ggcatagcag gtcgcaagga
781 tataccagat acatccggat atgttcaagg ttaccaaaat aaagatacat ataagggcca
841 gtagtattta tttgtatgct ctgataacaa ataaagtgtt gttaagatca tgtctgaata
901 caatatacat tcgaatcgac gctactcgct gacggtctga atttctttat catattgtta
961 gcggtctgac tgataacttg aatattagtt ttgcaaaatt tgtcatctat aaggctcctg
1021 agtagtcggc cgagaactcg ccgttgataa tagcgatgta gtatcgcaaa aaaagttaga
1081 actaataggt gtgatatgtg acaatgaaat tttctcttcc atgtcatttc gttcttacgt
1141 cagtttatta taaaaatgtg acttgtttcg tatt
//