LOCUS LJ579165 1106 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53201.graph_c0_seq1.
ACCESSION LJ579165
VERSION LJ579165.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1106)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1106
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53201.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 365 a 136 c 152 g 453 t
ORIGIN
1 aattttatat gtaaaagcat atttttcatt tttttcaata gctgtccgtt tatttttctg
61 tctaaataga cttctcttta cgcgtttttt tacgactttt tactgactat cagggagcaa
121 aagaaaagtg gagacccatt tttacaagtg tattaaaata attaagtatt ttgttttatc
181 taaattcttt ttatttacca tataatgaca acgtggcaaa aaatttcagt ttaaccgtgt
241 attttcttgt cagaatagac ttcactttag ttgtttttta cgaccattta ctgactgtta
301 agggagaaaa gaatagttga gacccatttt taataagtgt tttaaagtaa tctcattatg
361 ttgttttatc caaatcttat ttatttacaa atggcacgca aaatttttta tgtgtaattt
421 cttgtttatg acatcacgat ttcaatacaa ccgtggcgac tactcaaggg ccttaagata
481 ataatgtcgt aattaaggat ttttgacaaa atattaatga tatatttgcg gcaatcttta
541 ggaaaatctt gtttctaata tttatattgt atttttagac cgataaaaga tctgaaaaat
601 tttttttttc aaagttattt tattgttcaa cttattttat ttatattgtg taatatgatt
661 tagttagttt tacatatcgc tactattttt tgtttgatga ttggttgtaa cttggagcac
721 attctattta acgcttgcaa cactcacgag cattatttgt tgttttttaa ttttcaataa
781 gcaacacaga tgaaataatt ccaagagtta tgtagaacgc gctcttgatg agatgaaaat
841 aatataactt tgtagctttt ttacatcttt atttatttta ttaacgaggt ctttttggga
901 gtagcagtta tatagtataa ttaggtttat ctacggcaca gtatctttgc aactacattg
961 tagcaacatt acaatcttgc atatcgcagc aagaaaaatt attaaaatat aaaagtttat
1021 ttttaataat atagtatcaa tatttttaac acattgtatt aagtaaaaat aaactgttaa
1081 gcttttatgt ataaaaaaaa aaaaaa
//