LOCUS LJ578875 1807 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53635.graph_c0_seq1.
ACCESSION LJ578875
VERSION LJ578875.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1807)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1807
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53635.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 696 a 250 c 275 g 586 t
ORIGIN
1 agttaataac ttttttctca gtgtgaaata tacgtattga tggaatattt tagtttacat
61 gcttaattcg agagtaaaat atcgagcata gtttttttca aacaaatgat cagaataaca
121 tattaatacg tatatatgta taatgaaaga tggatagacg tgaaagctat ttaaagatac
181 gttaaaagaa gtcgacgtgt aatctattaa tactcataaa atctgcatac ccggcctttg
241 aactttgttc aattataaag cataaacggg aaaaattcta agactgacgt tacgcttttt
301 cgtgttatgt cccgaaaaca tattttcata caacgatgat tgtcgggcaa gcttatctgt
361 actagtgagc agtagataag ataagatgca tattgtggta agataacaga tgaggtatgt
421 gaaagataaa ttagtattaa cccttcgcga tcctaattat tatttctcaa aaataataaa
481 gttaagaatt tcgttctcag tttaatttaa tcgagtttaa cattcgattt atattacttg
541 tgtatgtgtg aaggaattat attatttcaa agaatagaca ttataaaaat ataatttaca
601 aattgtaatc gtgcatacga atgttgagag aactatttct ggagattaca ctatgtcgag
661 ctaataaaat atcgactttg gaacgacaaa gagttaaaac aaaagacaaa gtgaaaagat
721 ggaaaagatg gaaagtgtaa gaaaggaaaa gacggtgtaa caaaaaaaaa aaaacagtat
781 tgtagattga aaatataaca tttgtcatgt aataagccaa tttgagcgtc acatacgcaa
841 ctgcgcaaaa taattttaaa aaaatttttt tcaagtttta tgtcataaaa aatatttaac
901 catgcgtttc aatcattcta acaatattat tttttcaaag tcacatagaa aatgaaaaat
961 attcgaccat gaatttcaat cattctaacc atatcaaaat tcaaagcaaa tatcatctat
1021 tttaacctgc aattgcattc tagtcgattt cagcattgtt aataatgcag atatatttcg
1081 cgtaacaata cgtccaaaca aaattacacg cgcttaatta gaatagcgct taatagtaat
1141 aaattattat ttcgaaaata catacgaatt aatgaacaag tcttaataac aatgatctat
1201 taataatttg ctctttctct aacgaagatg tgtaacgatc gtttgtgagg agcgatcgga
1261 taaaacgatc tcatatgaag actcatgatg tgcacaaagt tttaatcaat aatatttttg
1321 caagtatact ctaatattta aataacgcgc gaataattat agacaagcga tacataatca
1381 gtatgttatg ttaaaagtaa ttgtttgatg ctcttgctaa attatagtaa tgatttgaga
1441 aataattcca gattaaataa tatgaaatcc aaacaattaa tgcggtgatt ttataaaatc
1501 aagacagtca tgcatttact tttataaact attttgcatg atatatatat catgcaatta
1561 ctttttataa aatcaccgtg gtgactttac aaaaaaaaaa gaaatatttc aaaagacatt
1621 atgaaccgct tatgtgtata aatcaattta ttagccggcg attctacgta atcgtcagaa
1681 atttcatgaa gtggtcttcg aattaaatgt tttcatcata atctataatc tataaggcaa
1741 caactcgcac ttccgacatg cacgcgttca gagatcagtc acgggtccgg ataaatttac
1801 gctaccg
//