LOCUS LJ578833 971 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53661.graph_c0_seq1.
ACCESSION LJ578833
VERSION LJ578833.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 971)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..971
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53661.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 295 a 204 c 198 g 274 t
ORIGIN
1 tactatcctt gctcacgaca acccgcgtac agatgacttt cgtccatttt cctttgccca
61 ttaagctacc gcacaaatat tgcaaattat aaatcaattt aaatatcgaa gataagattt
121 taagaacgtc aacagaatat actttgtaca tacttgacga tactggcgta agaaggacga
181 tgttaaaatc catacatatt tcatttcttt ccgagagatt tctagtttga acgaacagaa
241 tgttaaatgg atattagaga aaaatctaat ctgttttcaa ggggaatata attggcatta
301 ggaaaaaaaa aagtcgtctt taccgcgagt cgccgcgaga aatgttatga agaaggtggc
361 gttacgccga ggaaaacata ctgcttgaaa atgcgtctgt agtctgattg ttgacaaggc
421 aatgatgtga cgatagtcat cgcgtaagtc tctctggtcg agataatata aaagattgtt
481 gcgtaacgcc acctcagttt acagcgaaac aggtcgtacg tagtcgtaag gtaaagatgc
541 gaggagaaga tatcgcatcg gcggcccaca aggttccagc gttcacgtat gcagtactgg
601 aagacaccga tgacgtcggc cgtaagacag aagaggatct taatcctttg tttccaggtc
661 ctgtcttcca ggtccagtac cccgagtatc ctgcagacac aactccgctc aacatctgtt
721 cccattgtcg ctggctgtcc tttcaagcaa ataaactact gactgaaaga cattatgaga
781 aagatgtacg aggactgtcg ctccgttagt gacaatcaat cccgaatagt cccaaacaaa
841 cgtatcacag ttcctccttt cgattcggtt ttttaatgac acaaatttct ttctagtttg
901 acaggctccc ggtaatggac gatcagctta caatatttac gcttacaatt ctattttgtt
961 ctttaattcg g
//