LOCUS LJ578822 1084 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53337.graph_c0_seq3.
ACCESSION LJ578822
VERSION LJ578822.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1084)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1084
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53337.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 377 a 171 c 226 g 310 t
ORIGIN
1 ggctgcagta ctaaaaatcg ataaaactta ttgacgagcc gtacgagcaa tcggaattaa
61 agaaacttct tgagaagaag tatccttaga gcgaagttat ttgtttttct ccaacgccaa
121 ttttcgatct gtcactttat attgattgca tcattgaaat aattgatgga gtctgcaaca
181 cgtatgatca ttcgcagaga agaaattgga gaatttgggg cagatatatt agggcagata
241 aatcgattcg caaaaaggaa tgattcgcgt gaaagagata ttatttatag gaaattcagt
301 ctcatcacgc gtattagtgt gccaatagat cgtgtcgaaa cggcgacgac acagtggcga
361 acagtgtcat ccatcaatct tggacataga agaatttgcg atcaagaaag catggaggat
421 cgattgctcg gcggtcatat tgacgggaac agatatagct gtttcaacat tgtttttctt
481 caatatcaag actaatgtaa ttaaagaaga attgaatttc gatgacgact cgcggaggaa
541 cgcggactca aatatcaaat gtgatgaatt tgaatccgaa caatcgggtt acgcgatctc
601 gtaaaaaaac aaaaaaaaaa cagaaagact tgtgtgattc agtaataagt gttttcaaac
661 gggggaagca gcccgattcg gatatttata ggtgatttta gatttattaa caaatgatct
721 cattagtatt agaaattctg ttgtaagttt aaggtttaaa cttagggttt agctttacac
781 aacacatcga cgaacgcgta ctttactagt ccaatggacg agatttaaat gcggaattgt
841 aatttttatt aaaggacgta gatttggagg tttcggagga gatagctgta gacacacaca
901 cgagttttat cacgtaatac atattagata gcatacactc ttcttaccgc caaaattttc
961 agttggcatc tgcgttaata ataacgacta ataaacattt atacgtaaaa aaaaaaaaaa
1021 actaacattc gaatatatta catgaggtag tagcgatcag agtctgcgtt gataccactg
1081 caat
//