LOCUS LJ578176 1088 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c52609.graph_c0_seq1.
ACCESSION LJ578176
VERSION LJ578176.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1088)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1088
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c52609.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 374 a 152 c 176 g 386 t
ORIGIN
1 attattttgg ttcgtttgtt tgatttaaat aagagagaat tggagagaaa aactcttata
61 aaaattctgt ttctattaaa aaaaaaattt tttttagaat ttataaaaat tattccatta
121 gatatttgct tattattgta cgcattgaat atgaaattcg gtgcatacaa taataatttt
181 ttggaatatt acatatcttg ggatgctgct ataatttgga tcttttattt atttgttaca
241 gcttcaatgc cgtcaactcc gctgttgcgc atcgattggt gagtgacaaa cttttatttt
301 atttgaaggt aatggattta tagagatcgt agatgtagat tctagataaa ttcgttacca
361 attattagac atacttttgt gtgtcataat gaaatattgt gaatgtatat atcagggcac
421 aatggataat attgttcaat tttctgttta agaataaatt tgttgctata acttaaaata
481 tataattatc gcgttatcgc gttagaatct gtaccattca atcaaatcgt gatcattctt
541 tgcatcttaa acattacaat aaataaaatt ataagaaagt taatatataa tcaaaatgta
601 attacgtcta tgggaaataa gcgaggtaaa ttacaaagaa atcgtatacg atattcgcaa
661 tcgcgactta gtttagctta ttaaaacgtt cacgccgcaa aagaaagcac gcacgtcgcg
721 ttattaacaa aatttacagt taaaatattc ttcagtagaa aaagataata tcctttaaat
781 aaacattatt tgtactaatt tatcgaaatg agagtttttc tcgcagcggc atattcattc
841 atttgaacta tgaaaagaaa tgtattatcg tttatcagag tcgtataaat accatcgtta
901 acaaaaagct tattagagct atgaacgata tagtgttttg tcctgccgaa ttgaacctgt
961 catttcctgg tgctttattc acatcgtaaa aataacgatg gtaagcattg tcgcaatgag
1021 acggccaatc tttaaagcac gccgcgtatg ccacggcatg agcgatgtaa ttctgcgttg
1081 ataccact
//