LOCUS LJ577558 1194 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c52236.graph_c0_seq3.
ACCESSION LJ577558
VERSION LJ577558.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1194)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1194
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c52236.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 354 a 227 c 208 g 405 t
ORIGIN
1 ttttttggta tcttttacaa ttctgccttt atacgcacat aaaatttaga cgaatatatt
61 ctacattgtc gttattggat atgtctcctc gacattggtt tcggaggaaa ccattgtacg
121 taattctcca acgttgtcgt ggttctaacg actcgatctt tagatctggc gccgaccatt
181 tttggcctgt gccttctatc gtcgttgtat cgggataatc aggtagcacg tagactcgac
241 catccgatag ggtgacttgc aacatcaatt ctgttgtatg atatccttta tgaatcattt
301 taacaaataa ccaattgccc ttttgatcgg caccataaaa ggatatacta tcgcaactgt
361 tttcatccat aataattttt ggatcgtcaa aggatgcttt caacatcttc tttatattgg
421 atatcacatc gctgttttta agcttgcttc tctttgtttt ctttgttccc tttgagatgc
481 accaaagagc ccaccatcgt tttaggataa attgtatatc taaacccaga taatgcgaga
541 gctgcttttt caagaaccaa agataaatcc atatggaaca aatgattaga atcattattt
601 gtatggcaca cataatgcat accatttatt tattttctaa cgtggcacaa atttatagtt
661 tgcaatgaat gtccgcttac gacacataca ctcctataac aaaagcaagc atgcatgtaa
721 catacacaga acatatatgt acgtatgtga atgctaccat ctagcagaga gaagacttct
781 cagactcttt ctctctccta ttatatatca gtgactatcg taacattgac gacgttatcg
841 cgttagattg aaatgattca aggtccctcg ttatcgggct aaacaaagta ttttcttaca
901 tacgtatcaa atataatcat acttggaagt agtttgatga cgtgtgaaca cttgctaagt
961 gactcgtccg aactatgaat gtgccgttat tcactttttc ttgccgtgta tgacgttgtt
1021 actgtgtaat ttccttctac gagtcctttg tcacactgat cactgaacgc gtagcgccaa
1081 gaacggttac agataatatt atcatattaa ttttaagttg attgtaagat tagattattt
1141 attaaaacaa aagaaagtga aaaattatga cagtgtgagg gagaggagaa tgaa
//