LOCUS LJ567678 830 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c44862.graph_c0_seq1.
ACCESSION LJ567678
VERSION LJ567678.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 830)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..830
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c44862.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 224 a 175 c 157 g 274 t
ORIGIN
1 gcgattcagg tatgtttgtt gcatcatatc atcctttttt tataaaagct aatatgaaat
61 acctcgtaag atatttagtt ttcaatatcg tttcgtcgtt atatatccaa tcgtttgatt
121 ttcatattga tcaatattat gtttaacaca atgttggcat aaagattata tagcgaattt
181 gattggactg cactattgcg aactaacaaa agccagtaca catatacgaa aagtcgctgt
241 acactaattt aacccatcaa gtaacatgtc acatatcttt cgtatgtcga ttagtgtaca
301 acggtcttaa tgtacaccag tgtgcagtag tgcgccccag acttcaggta ctcggcgtaa
361 cggaaaagca gttcttcgat caaatgggtg tgcactttgt aggattcgtc ggtcagtatg
421 gctacgatcg cgtactctcg gtgctcggac ggcatgtgag ggattttctc aacggtctag
481 acaatctcca cgagtatctt aagttttcat atccgagaat gcgagcacct tcgtttatct
541 tcgacaatcg cgccttcacc ttagcatcac tcgcgatgac ccgtgaggag aaacacctgc
601 cgatcggggc gtgcgtgctc tttgagatat ttcctttctg catcgtcttt gggtgcgtgc
661 ttttaaaaat atccacatat agaacgtgcg taaactgcat aatcttcttc aacgaattta
721 attcttttat aaaagtataa acaagccaac cttaatagcg ttttatgttg ttcaataatt
781 gctctctctc tttctcttat ctcgagtctg tatagataca tcctcagtcg
//