LOCUS LJ561455 1150 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c40173.graph_c0_seq1.
ACCESSION LJ561455
VERSION LJ561455.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1150)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1150
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c40173.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 388 a 193 c 197 g 372 t
ORIGIN
1 acacacacac acacacacac gtaggtacac ataggtatta tgcgagctgt ttattttgaa
61 agcaatcgag aatatctaat cacaatggca aatttaatct cacttaaatc cgtgctcgca
121 cacacaacta acaacagttt tcagaataaa cggttcactc ttgctagtct agctcaagtt
181 attgtaagta cgtttttgtg atatttagtt tatcttttat aatatacggc tcgaattaaa
241 ttcctcccgg agatatcggt gttttaggat acatctttat ttatacataa gtaaggtgtg
301 ccaaatgtgg aacgtgtaca tttttagaga aagtatatcg atatacgggt gagatgtaat
361 tttgtagtta aacagcgtga cgtaaattca ggcgaaacgg ccaggctgct gacaaacgaa
421 atcgtcgttg aacgtttaat aattttatta aacgttcaat aaaattatcg tcttcaataa
481 atagtttttt tttaaatctt tgccattaaa agaaaaaaaa attcggaatc ttcgaatgac
541 acgtacaaat aaatttatgt ggacgatgag ttgttttcgc gctgtcttta aaattattac
601 gtatagaaaa cgtagacgtt tcgtagacat tttgttattt agtcatttgt aacacgtgta
661 catacatttt atttattaca agatattttt cagcgacgtc tttttcacaa gagactatac
721 aggctcttaa tacttggtag ccattaagat tctctgcgat cgaattacga acgcgctcta
781 tgtatcgaaa acacgaattc tagttgattt agcgccgatc gatataaaaa tgacagaaaa
841 aaaaagagga atagcaattc ggcgatcctt ttgcacagct ttagacgtta tattatctct
901 cgcgagggga agttatttca aactctcccc tcccccctcc tccacgttga atataattaa
961 atatgttttc tatatttata aaacgcgagt ttgtacagct tacgagaaat gtaaggagac
1021 ggagcgttac gatctgagaa atgacttatt gtactgtatt gtatcttatg actgtagtac
1081 caccgttcgt caaaatatta agaagaaata atatatccaa ttctgaatgt gttaaaaaaa
1141 aaaaaaaaaa
//