LOCUS LJ559834 1601 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c39596.graph_c0_seq2.
ACCESSION LJ559834
VERSION LJ559834.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1601)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1601
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c39596.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 535 a 263 c 293 g 510 t
ORIGIN
1 gagcgacggc atggcggact actcttctta ctatggtagg aacacgtcga ccactttgcc
61 gaaaaagtat ggttctaccg ttggtggcct agaacccaag agcgtagagt attacgagga
121 gattctctca ccgagcaatc ccgactgtct gtcgccacgc gatacctgcc gatcgccttt
181 gttggatatc tatttaaaca gatgcgaaaa cgaatgtaat cacaatggta atttgaattc
241 gcaacagttt aacgtcgata aaccaatggg ctacactgcg gatgcggaga ttatcgaaga
301 ggactgtaag ctgtcaggat gaacgaaaaa ggtataacgt aaagaaagaa aaagaaaaaa
361 aaattatatc gacggtctcg ctttcaattt atttttttaa ttctttgtct ttaagatcta
421 aatctagtac tgcactgtat agttgtgttt gcataaataa tttctctttt tatagaaaca
481 caatgcaacg cttcggtgaa atgggacggg ggatgcgtcc tcgacagctg cgaatatcct
541 atcgaatatc ctatctgtta ccgaacggaa ttgactttat tcagacgaaa agtaattttg
601 taaaatattt gataatatac cgaacgcatt ttacaatacg attttataat acaagtttgc
661 aacaaagtgt ctcgcgcttc ttcgtcacag cggtgaaata gttgcgatgg cattaaaaat
721 ggcacgatga atattattaa atggtcaaat atgcatcgtc gtgttaaaac acacgctcaa
781 gtttcaaaat tgctttttta caagaagctg ttttaaaatc cctttttgtg atctaatttt
841 ctaagaagcc cgcgaagaat ttacgtttaa tacaaaagtg cccagaaatt ttatatttat
901 tttcctttct ttttcatatt acatcaaaaa tgagaaaaga aatgtgaaag aaaatatcga
961 ttattttttc atcgtacaaa tttaagtttt ttctctctat tgtcacagag aggatgtaat
1021 tgttaaccga tatcttctct atgattaaat ataggctaag acagcacttt gtgtcttcga
1081 tatttataga aatataaata taataattgg cagctgttct tattgtagct ttcgcagcga
1141 taaaaaaatc ttgccattta ttggccattt atggtccaaa gtattaactt gacaaattta
1201 agctgcgtga aatcttttta ttggagggat tttttttatt ggaaaagtct atcgaatcaa
1261 tttttatcag tttttatcag taattgtcat aattatcttc atcgcgagga taaaaacaat
1321 ttgtaaatac gtgaatactt taagagtaaa ctatcgaata tattattgac tggcagcaag
1381 aagattatct atagcgtcac atcaattaac aattaattaa gtcgagtcgc tcgaagcggc
1441 gtgacgtaac gaaataggcc aaagactagt gtaaaagaga aagcgcgaac gatgcgttca
1501 agttccttag acaagtatcg ctttatacag tcaaattttc gtaattcttc tataatcttt
1561 tcacatgtaa aagaaagata taaaataatg aggagaagaa a
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