LOCUS LJ559833 1457 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c39596.graph_c0_seq1.
ACCESSION LJ559833
VERSION LJ559833.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1457)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1457
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c39596.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 485 a 246 c 274 g 452 t
ORIGIN
1 gagcgacggc atggcggact actcttctta ctatggtagg aacacgtcga ccactttgcc
61 gaaaaagtat ggttctaccg ttggtggcct agaacccaag agcgtagagt attacgagga
121 gattctctca ccgagcaatc ccgactgtct gtcgccacgc gatacctgcc gatcgccttt
181 gttggatatc tatttaaaca gatgcgaaaa cgaatgtaat cacaatggta atttgaattc
241 gcaacagttt aacgtcgata aaccaatggg ctacactgcg gatgcggaga ttatcgaaga
301 ggactgtaag ctgtcaggat gaacgaaaaa gaaacacaat gcaacgcttc ggtgaaatgg
361 gacgggggat gcgtcctcga cagctgcgaa tatcctatcg aatatcctat ctgttaccga
421 acggaattga ctttattcag acgaaaagta attttgtaaa atatttgata atataccgaa
481 cgcattttac aatacgattt tataatacaa gtttgcaaca aagtgtctcg cgcttcttcg
541 tcacagcggt gaaatagttg cgatggcatt aaaaatggca cgatgaatat tattaaatgg
601 tcaaatatgc atcgtcgtgt taaaacacac gctcaagttt caaaattgct tttttacaag
661 aagctgtttt aaaatccctt tttgtgatct aattttctaa gaagcccgcg aagaatttac
721 gtttaataca aaagtgccca gaaattttat atttattttc ctttcttttt catattacat
781 caaaaatgag aaaagaaatg tgaaagaaaa tatcgattat tttttcatcg tacaaattta
841 agttttttct ctctattgtc acagagagga tgtaattgtt aaccgatatc ttctctatga
901 ttaaatatag gctaagacag cactttgtgt cttcgatatt tatagaaata taaatataat
961 aattggcagc tgttcttatt gtagctttcg cagcgataaa aaaatcttgc catttattgg
1021 ccatttatgg tccaaagtat taacttgaca aatttaagct gcgtgaaatc tttttattgg
1081 agggattttt tttattggaa aagtctatcg aatcaatttt tatcagtttt tatcagtaat
1141 tgtcataatt atcttcatcg cgaggataaa aacaatttgt aaatacgtga atactttaag
1201 agtaaactat cgaatatatt attgactggc agcaagaaga ttatctatag cgtcacatca
1261 attaacaatt aattaagtcg agtcgctcga agcggcgtga cgtaacgaaa taggccaaag
1321 actagtgtaa aagagaaagc gcgaacgatg cgttcaagtt ccttagacaa gtatcgcttt
1381 atacagtcaa attttcgtaa ttcttctata atcttttcac atgtaaaaga aagatataaa
1441 ataatgagga gaagaaa
//