LOCUS LJ559534 1625 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c39213.graph_c0_seq1.
ACCESSION LJ559534
VERSION LJ559534.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1625
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c39213.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 640 a 209 c 187 g 589 t
ORIGIN
1 taaaataatt tttaatggca taaataagat gtgttgattg gaggtgcatt taaaaaatat
61 ggagagagat gtatattttt aatatttatt ttttaaagta attcacatat aatgcggatt
121 ttgggaatac ttctaaggat tgcgtaatta tttaaagtga tatgtgataa gctgccactg
181 caaatatata tgaattaaat aaattattaa tttttaaaaa tcttcatctc tagccatgta
241 ttattagtaa acactacaaa atacgaggca cataaatttc cttattataa aactaatgat
301 aaatatagcg aacattttaa ccaaacttac atctagttgt gtaattatgt tattatatat
361 aaaaaatacg tgtaacgaaa tgataatcta ataaaaatct ttatgaatca agagaaggtc
421 tatctacaaa ataccatata agatatttgt atatatgtac aaaaaacttt taaattatcg
481 cattttggac aatacatata ttccaaagtc attaaacaat ttgatttttt ctgtaaagag
541 ctgcgtttaa tatcagtgaa aaaataattt gttcacacac gatgctatct tataatgcat
601 atcaatttat acgtacattg taaaacgcaa aatacaaaac ctggtattgt ttgacgtaac
661 aatatttttt atcatcattc aaaatcgtct tattttatac aatttataca attttcaaat
721 attgtagatt tgatcggcag ttaaaagtag cgtaaaaaat gatattgcat agcttttttt
781 cgctatgcaa agatataaaa tataaaaata acatacacgt gtcaatgggt atatagaact
841 tagaatgttc ttttatgaaa tataaataat attaaattat aatgaaaagt ttaggtcttc
901 tccccgcgcg caagattccg tttcatattg ctttataaat catatcaacg ctatatttcc
961 ttctgcctgt ttactactaa atgcgtcata aattttaacg aatttgtatt gtattttgaa
1021 gtcgtataat atcatataaa aagatcagat taaacaattt atatatatta atagaaaaca
1081 ggcacattaa aaattatcca catctatcaa attatcttcc actgttttgt atattcaaga
1141 tctgaaaata ttttaggaac aataaaaata tttttccaca gatccaagaa ccatcctgct
1201 tgtataagaa ctatatataa aatagattac caaaatggtt atatacatat atcaatttat
1261 aattgcagta aggcaactag atctcgagat actcgaatct atcactaatg acacagttaa
1321 cttttcacaa taatgcttta tattaaaaag ttccacaaat aattctgatc attacatatt
1381 tatgtcttat taatattgac agagcgatat tataaataaa acttgataga tgtctgatac
1441 aataaaattt cagcaatcaa tatttgcact taataaaatc ttatttaact atattttaaa
1501 tgttttataa tgcgataagt taaacgaaaa tctgaaacaa gtttaaatga actatattat
1561 aattaattca tataaaattt accaaattct atttgaaatc tttcctcatt tgcatcgtta
1621 taagg
//