LOCUS LJ553507 1075 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c33798.graph_c0_seq1.
ACCESSION LJ553507
VERSION LJ553507.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1075)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1075
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33798.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 405 a 151 c 218 g 301 t
ORIGIN
1 gcagagtaca tggggacatc gtgaacggtc gccgtagtcg ccggtcgtcg tgttgggtta
61 cacgacgttg catattagtg atatatcagt gattctacga tctaccgact aacattcctc
121 ttatttgata aaagctacaa tgctgctagt aaatcgtata attctattaa attcattatt
181 cgcgtacact gctttcggta atctcgagga agagcatggg gttaaatacg ccaataaatg
241 cgaagtgtgt aaagttttag ctacagaact tgaggctagg ctagatgaaa caggaaagac
301 acgtgacgtg ttggaatttg gatattcagt ggacgatgtt gcaccaaaaa agaaaaagga
361 atacaagaag tcagagctac ggttattaga atccatggaa gatgtttgtg aacgtatatt
421 ggaatacaat atacacaaag aacgtacgga cagtacaaga tttgcaaaag gaatgagtca
481 aacatttaag acattgcatg gtcttgtgga tagaggagtt aaagtggatt tgggtattcc
541 ctatgagttg tgggacaagc cttccgtaga gataactact ttgaaatcac agtgcgaaga
601 tttactggaa aatcatgagg ttgacattga aaactggtat cataatcatc aaggacagat
661 ttctttaatt agatatttgt gttctgagcg tgcgttaaaa ggacaaaatg attcttgcct
721 acacgagaag accgatacga cgaaagaagt taagaaacaa aagaaaaaga aaaaggaagg
781 tacaaatagt aaagaaaata taaaagacaa agattcacag aatgtgaagc aagaattgta
841 aaactgagaa taaacgaaca aattcgttta gatacctttt attaataatt taaatagaat
901 acaatcctat atccagtaga aatgcaatct aacagacttc caatcctgta tataaaagta
961 atctgtaaat attagcattg tttaaatata cttggatata tgtgccatat ttattgtatt
1021 gttgcaaaaa ttttacaata aacttctttt atatatttta aaaaaaaaaa aaaaa
//