LOCUS LJ553399 1117 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c33540.graph_c0_seq1.
ACCESSION LJ553399
VERSION LJ553399.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1117)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1117
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33540.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 315 a 234 c 263 g 305 t
ORIGIN
1 acgcagagta catggggcct ttatattcat cctttggtag acgcggtacg tacggaagaa
61 tccgttccaa tcggtgatat aacgtgaccg agaacgattg aagatgaccg agactttaca
121 gctgagaggg acgcttcgcg gccacaatgg atgggtcacg caaatcgcga caaacccgaa
181 atatccagac atgattttgt cttcttcacg tgataagact ctgattgtgt ggaaattgac
241 tcgtgatgaa gctaactatg gtatcccgca gaagcgtctc tatggtcact cacacttcat
301 aagtgatgta gttctttcat ctgatggtaa ctacgctctg tctggttcat gggacaaaac
361 attgcgtctt tgggatctcg cagcaggtcg tacgaccaga cgatttgaag accataccaa
421 ggatgttttg agtgtcgctt tttccgtgga caatcgtcag attgtttccg gttcgcgaga
481 caagacaatt aaattgtgga atacattggc cgaatgcaag tataccatcc aggatgatgg
541 gcatacagat tgggtcagct gtgtgcgctt ctcccccaat catgcaaatc ccatcattgt
601 ctctgcaggc tgggatcgcg ttgtcaaggt ctggaactta acgaactgca ggttgaagat
661 caatcatagt ggtcatacag gatatctgaa tacagttacg gtatcgcctg atggatcact
721 ctgcgcatcc ggtggaaaag attgcaaagc tatgctgtgg gatctgaatg atggaaaaca
781 tctccacact ttagaccata atgacatcat tacggcatta tgctttagtc ctaatcgtta
841 ttggctgtgc gccgcattcg gaccatggat taagatatgg gatcttgaga ctaaggaaat
901 ggttgaagaa ctgaaacctg aggttgtgtc tgcaactagt aaagcagagc cacctctctg
961 tttgtccctc gcgtggtcca ccgacggtca aacgttgttc gctggatact ccgataatac
1021 tattcgtgtc tggcaagttt ctgtatccag cagataaata ttttgtaata aatgattaaa
1081 ttcaattctc aactgtaaaa aaaaaaaaaa aaaaaaa
//