LOCUS LI539526 3488 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33804.graph_c1_seq12.
ACCESSION LI539526
VERSION LI539526.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 3488)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3488
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33804.graph_c1_seq12"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1276 a 470 c 490 g 1252 t
ORIGIN
1 atattaaact atatagaaaa agagagcagg aaatgcgaaa atatgtaata aaagcattta
61 aaaatgtaac aatttttatt ataaaatgcg cacgtctttt tgctgataat ataaaaattt
121 atgtcatata caaaattgag catatgagaa agattgtcga aatcttttta taaatcacct
181 tttcactgaa aaggtgtaaa gcccaaatca gtacatgcat taaatattaa aattaaagat
241 tgaaattaat cttcaattat ccattttcaa tgcatatttt gatatgggtt taaaacaatt
301 ttttattttg tgtataaata tattaaccga ttacattgtg atgtcaatat tatgattatg
361 attataaata ttcctctccg ttcatgttta ttgtgatatt ttgatggacc atttgattga
421 tgattagact agattttatc ttctcgcctt tgttggtcgg ttcagaggca gaatctatag
481 tgtcaccatc cacatcatta tgattaggta gctcatcatc attaaatgga tcaatttgtg
541 atgttcctat attcctgtaa tgttgatctt ccggcacatt aatagccact tctctagaaa
601 gcgggttatt gttggaattg gaattattgt tatcggtatt attgtttgta ggagcgtaca
661 catttatatg cctgtgagtg aacggaatag tagcttgata ctggttagtt tctctaatcc
721 cttcattatt attatgcggt acacaatatt ttgtttgacc aaatccaatg aacggctctg
781 aaaacaaaca tttacaaatt ggttatgcag ttaattattg catattatca cactattatt
841 gataaattat aatgtataac tgtttacaga agaattaccg cgttttgtat cttcacactt
901 tcaattcagc gttttcaaat acatagataa accatagatg tactgtaatg taataattaa
961 catttttttt cgttatcata tacatttaat cgattactct ttcgtgcatt atcgtgtgta
1021 tataaaatat tataagcgtg cgattacaga aagtgcaaat tatttttgta acattgacta
1081 atcaatttat tagtttatgc agacattgca agtttgaaaa aaattgtgtt ttccatattg
1141 catatgttct gtgcattata taaaggcatc catttctttt tgagatttca ttcattaaac
1201 agtcatgaaa aaataaagtt ttctttcatg cagattcaat cgtcaattga tcgctcgcag
1261 tcttgttcat atcatgtgaa ataatttaga gatgtaaaat gatgagtaca ttatcttaaa
1321 acaaagctaa tttggaaaat ttaatacagt ttttttgcga actatattat gctaatctgt
1381 tatagctggc aatgcagtta tgttaacgat tattatcttt atccttgcaa atattatttt
1441 catgtgcaaa taacaggagt tgcacctgat gctcaattta ttaggaataa ttcagattct
1501 tatcagatct ctcgcatgga atattttact attagaattt ttttataaat atggcagatt
1561 gcagaatatt ataatactaa atttaaaaca tactttcttt tagtataaaa gtctttgttt
1621 ctaattattc aaattaaatt ctattgtgat agagtcagta acaaagaaat attccatata
1681 attaaaacaa tgcaacaaaa cttaccacca taaaagcaaa ataaaaatac atatatatct
1741 atacatgtat atacacacaa attgtgtgta taaatatact tactttcctc ttctggtgga
1801 acactggcga ctgctatagc attggcatta tctggtgcta cttctggtgc tatatctgca
1861 ttatttgatc tagagctgcg tctttgattt gcgcggtctg aaaaaatgta tttaatattt
1921 aaatttttta ttgcgattca acattgaatt atgtaaatac attgtaaaaa atattacaga
1981 gttacatcaa caataagtat aatttcacat actgttttta aataatactg atttttttta
2041 tagtctgttt ttattacata agtttattat aaaaatggaa ttacaaagat agccggattt
2101 gacttttatt aataataaaa tgcaatactc tcttttacat agatacgaca acacaaattt
2161 tgactttata cattatatac aaaaaatata aaaagtgtgt aaaaagtgtc caatgtttgt
2221 aaaatagaaa aaaaacataa caaaatatag catatttata aagaaaaaat taaaaaatac
2281 atctggttaa aaacttacag cacttgtaaa gttgatgtga ggtgaacgct attaaacttg
2341 gtattgccac taccataatt atcactataa ttgtatatac gtcggacatt gcattagatc
2401 caactgcaaa tgagataaat atactgaata attagaggaa aagcaaaaaa ttatgtaaca
2461 tacttaagat atatgtgaat gttaaatata tcgatttttc acttcgacgt gaataacaaa
2521 cgaaaatcaa caatggagca tataaacaat tattttccat ttgtttaacg aaatccagga
2581 atgacagcat cacttacctt gattatctgt atatttacac aatggcattt cttcgccact
2641 gacgagaatc tcagatgcgt atctataaac cgaaaaaata gacaattctg taaaaaaagg
2701 gcaggaggcg attcttttat attgcggaaa tacacgtata tcaagtgtat gattctctat
2761 tattttacat aatacgctgt ccgtcgccga ttttaatgat tacaattata tcattctaat
2821 cggacatttt attatctgcg atcggtgaag caatcattta atcgattaaa gtgaaattgt
2881 atattgatat ttgtcattca tcaattctaa gttgccaaaa gacactattt atataaaata
2941 tacatatatc aatatataaa gtttacactg tgaaatattt attttttata gacgaaaatt
3001 cttatgtaat atgaaaaaaa atgtaaaaat attatgattg ttcattaatc tcgcgagaaa
3061 tattattttt aaccctttct gtcccgataa gactgtttcg tgtccagaat aataatacaa
3121 caaatacatt tttttaaaat ttgaagtagc attatttgag aaattatttc catcaaatag
3181 acaaagaaaa taatgtaatt tattaaaagc tcatttgtat ttttaaagca ttcaagcaca
3241 ttagcattta aagcacacta ataagaaatg ctgaacacat ggtcaaattt tattttgctc
3301 caatatactg gatataaagg gttaattaag ttgcgcgttc aagtgcgaga gattgtaata
3361 gatctcagta ttacattata aaatttattt gtaacacgca tgtataatgt cggtacaatc
3421 gaataaagtc tgtgctgata aacggaaaga gagcaaaata tgaagaagag aaaaaaaaaa
3481 aaaaaaaa
//