LOCUS LI539150 2422 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33431.graph_c1_seq9.
ACCESSION LI539150
VERSION LI539150.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2422)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2422
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33431.graph_c1_seq9"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 821 a 405 c 526 g 670 t
ORIGIN
1 gtacatgggg actcgactcg taatttttgg ttagtgacat ttctattcta acatatcgtg
61 gcatatcagt agaaatatat agcgtagctt ttatttttat acatcgagag tgtaaattta
121 gaaaactgag gcggacaata aatcagtagt ttcaagaaaa tgtcggcagt cgcaagaatc
181 tcacaagcaa atatcacgca agctacgaga aaacatacag ctaccgtgtt tttcttccac
241 ggttctggtg gcacaggaga agatataaaa aaatggattg atattcttaa cagagaaaaa
301 ctgcagtttc cacacataaa gttaatttat cctagcgcac ccagtcaacc ttatacacca
361 aatggtggaa tgatgcaaaa tgtgtggttt gatcgcatgg caatatctaa tcaagtgcca
421 gaacatgtaa agtcaattga ttctatgtgc caaaatatat cagaattgat tgatcgagaa
481 gtagccaatg gaattccatt taacagaata attctgggtg gtttttcaat gggtggctgt
541 cttgcattgc atttaacata caggtacaaa acatctatag ctggttgttt tgttatgtct
601 tccttcctga acaaaggatc tataatctat gagcatttaa aagcaaggcc agaacataat
661 aaaataccac ttgtccagta ccatggtacg atagatactt tagttcctat tgaatggggt
721 gaagaaactg ctaaaaatct gaaggagctt ggcgtgaatg tgaaatttac accactgcaa
781 aatattgatc atgaattaag tcgtgcagag attcaaagtt ggaaagattg gctcctcaat
841 atcttaccag ataaataata tagaatattg atacgattgt cgaatctatg gaatatgctt
901 acaatttatt ttatatgaac agatattact tggatcaatt cttggactct tccttgaatt
961 ctgaaatgtt cgagatgctc ttaaatgttt aaacattaat cattgagctt cggaatatat
1021 atatatattc ggactcgtta ttcagcaagc aaaattattt ccccgcaccg gagattagga
1081 tctcacgacc ctccttcctc taactttccc tgccatcccc ttcagcgtgc atatatacgc
1141 atgcgacgag aatgaggaag gggtgaaatc gccgacgagt ccatcggcaa cgagtgcgca
1201 gtgaaacgaa gagggtgagc tgcgacggga ttgctgcgcc cttcgggtga ctccggatgg
1261 ggtggatggt ggatagcccc actggcctgg cgttctcgtt ctcgccaccg acgtcgcgtc
1321 atgacacgga cgtttatttt tcgtcgcagt atcgactttt atgagaaaga tataaagcac
1381 acgttatcag ttattagtta cgatacaaaa caccccgatg tgagatcgat gtttaaccac
1441 gaggaacttg cgaagagggt gaagaacgtg aaggggaacg ttagttagtg cgtgttaagc
1501 taagaatatt cctatagggg ggaatcttta aaaaggaaga agagaaaacg gacacacgga
1561 cacacacaca tatagaatac gtatgtacat taatatacat acggggtgga aaacttgtat
1621 tgtaaaacga accgatatac acaatgatgg tgatatttgc gacgagcagt ttccgcggag
1681 tgaacataat aaaattgtaa gaagaaaaag gaagggcaga ggatcgacgc gcaaataaag
1741 tgattaaggt agatgtagtc tggacgtgtc gagagtagat ctgggtcatc acgaatggat
1801 ctctcgatgg atagaacgaa ataatatttt atcactttct atccaaacag caagattgga
1861 aggaagttgg gatcactagg atggatgcag ttgagtgctg aagatggatt tgcatcatta
1921 aaaatgtgtg tttttcatcg atgaacaaca taaaaaacaa tcttggacga tatagaaaac
1981 ttaattacag attaaagaag tgcatatccg gagaataatg taaacgcata caacgtaata
2041 tgatgagaaa gatatatgtt aattaattaa taatttaata gtaattatat ttacataata
2101 ttaattacca cattatcata cgatttaata tattgcctaa atagcatgag ataattggtg
2161 atattaatat cataaaagtt agacgaatat gtcgtaatat tcatcgagga agtaatatct
2221 tccttattat cttcggagtg catccgaaga cgcaccggtg aacgctcgac ggtaaataat
2281 atggcgcgtg ttggtccgca gtcggtgacg tcaaggactg agaggtatgt cgatggttca
2341 atgtaaagag ggcaacgaaa gtggatacaa cgaaatttcc caaaggacgt agagtaaatt
2401 tcccgaaaaa aaaaaaaaaa aa
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