LOCUS LI539134 5405 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33433.graph_c0_seq9.
ACCESSION LI539134
VERSION LI539134.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 5405)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5405
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33433.graph_c0_seq9"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1827 a 883 c 794 g 1901 t
ORIGIN
1 gggagtccaa actgagaaaa tccggcatgc ggctaaaaca gaatgaacct tcgcacaatt
61 tcgagatcca cggcgagata aagagtgcaa gcgggacgta agagcaaaat tcgatacgag
121 cgtgtttaag gacagataat ttcgccatta atagagtatt tatgcaaatg tgtcgatttg
181 agacctagga cctcgcacgt gtttacaaat gtacgctcgt tattgctccc tcgttgtgta
241 aatcgaagga cgcgaatctc ccaaatgcac cccccttgat tgacgattga cacggtatcg
301 caacactaat aataatcatc aaatttaaaa aagtgcaaac ttgtcttcct aaaaattacg
361 ttttttttaa agagagaatt aagccatatt tgcacattat aatgcaaaaa gtgtggatta
421 tcgtctccat gattttgagc atatttttcg acattgtaag gatgagaagt gtgcaatcat
481 taccaacgag tagtagagat acaaaataca atacagaaat agaaaataca atacaattaa
541 gtacaatatg cgatatggaa ttaaataccg tgcacaatac ggaaaatatt acagaattaa
601 ataccgtata caatatgata ttaaataata caagtataga gtatgaaaat agcactcaat
661 atattcagct gaaaaaatat acattcattc aagaactata tagaaaagag agacaacgta
721 tatttgtaac gcaagctgta gtacatagta tattattagc aattatacta ttgatcatca
781 tcattgtgtg tatcaagcat aattatatca aaatcaattt acgctatctt cctcgtgccg
841 cacagacatt ctatcagagg atgcgttctc gtctatatat aatgactcca aatgacgttg
901 aagcaggtag tatttgggat gctagacagg cgtataataa tatgctcgca agacgcagaa
961 aacaggaggc aatgagatcg atattttatt acgcttcgcc tcaagaatct tacgatgaaa
1021 atgtggaatt tattcgcgaa caccaacgtc aaaccatatg accgtatgac tgcagtattt
1081 actctctgtt ttttgacagg ttgtgtatga actactcttt tattattata catcttctat
1141 catacatttt atacttatta tattatatat accatatgta tatatatata tatttactat
1201 ttatatttat tactatgttt atattaaatt tatataatat ttttagttat taaatagttt
1261 tatagtgttg ttaaatattt ttttctttat cattttattt agttttatat aagagttatt
1321 attatcaatt attttagagc taccatattt atcatccaat aaggtttaca ttaaattcat
1381 gaacaggact gttattattg caaatcaata taacgtctct gttaatctgt gatattgcta
1441 aagtcataga tacaaaggtc tattgctaca gctattaata gttgtctaca gctaaagtat
1501 tttatgtaca ctagagtaaa aactcgatgt acaactttga actatcttaa ttaatatctg
1561 aacaacgcaa tctgtctata aaataaagta cttttctaac aaattttgct gtgcgtaaca
1621 acgataagaa aaatcgacat ttaaagttat tactctaaag taaatttaac attaatcaat
1681 taaaattaat taatttttga tcagaattaa ttaatttaat taattgatta attagaattt
1741 taactttata attagtttta aattactttt taaaaaattt attattttta ttacaaaata
1801 taattctaat aaaagatgaa tttaaattta attatattat ttaaatttct attcttctat
1861 tttatgattt ttccattgtt ttttcgaaaa atttcattcc aataaataaa atttttgata
1921 ttgctaaatt taaagaaagt ttaattaaat cttaaatttt aataatagaa cgaataacat
1981 atgtaaataa caaaaatatg taaataataa attggtattc tgataaatta attgaaaaaa
2041 attttaatga caaaatctaa gattttatta aaagtatcaa attatttgat attcacaata
2101 ttaaataatt tgtttaaaag aaaatctaag atttttaaaa catcttagat tcttttaatt
2161 tattctgcac gcgcactgtt gtactattat aatataatat aagaatatat ataatagtat
2221 aataatatta acaatattaa aatctgacac tcgcctcttt ctacacacaa atatgatatt
2281 taaatatatt aaatatatca acttatattt atataagttt atattaatat ataaatataa
2341 taatatatat ttgtgtattt attatgtgta agatttttgg aatttagcct taatattttt
2401 taataaacaa attgtacatt aagatcgatg attatattta tgtatcacat ttttcatttc
2461 attatttgtt gtatctttaa tctctacaat caattgcttt ctttgtaaca aattgtacaa
2521 taatgtatat attatatgtt atatataata ataaatgtgt atataaataa aaattttaca
2581 aatgtaatat aagttcttag tttaatttta ttatcaaagt gctttatatt aaaaataaca
2641 acatgaagtt gattagtaat ttaaaatata ttaattaaaa ataatataca tatataattg
2701 cgaaacaaaa tcaatgttat aatgtgtcat acttatttta actgtaactc tttttatatt
2761 tataaaaagc gttcagacac gaggtacata tatcaataat aaagtattca tattttgttt
2821 tatacgcttt atactttact aaaaatgtaa tttaaatagc tattttagta tctttcctaa
2881 agtgaaatct caagtctctc tctcaatcta aagtcaaata aaatctctta ttttcttgat
2941 cgtcaggatg aatataagat aacttttctt ttagtgtcgt cacacacaaa tataacttgc
3001 ttttcgagat aaaatgttat tatcttaatt aaaaaattca aatttcttca ataaaaagct
3061 gtgaaacatg gagagaataa taatataact tcgtatacaa aatcaccaaa atattatagc
3121 cataaaagca attctcaatt tgtttttact tgtctataat tactgtttac tctctcggat
3181 cattattttt ataggagaaa cataaaaaag tgcattttag tttatagttc tcttttctta
3241 ttctaaatta atcgcgtgtg taacaacttc ttactctatg cattctacca ttaaaatatg
3301 tgagtggaaa tgagtggaaa atgaagggaa aatataaaaa aatctttaaa gtcccacaaa
3361 aaatatatag aagtttcact gtaatttgca acacttaaga gctcattaaa gaagacatta
3421 gtaattccat cttattgagg aaattttttc cttccatctt gtcccatctg acttctttaa
3481 aggagccccc cagattctcc cattttcttt ctcgaacaag ttggccagga aagaaatcct
3541 ttcgggggga atgagcaatg gcaacttgca cgcccgtttg tggttcgcat cgtacagcta
3601 tcattctgtc gccgattggc gaagctagaa tacaactact agcatttccg agaggttcca
3661 ctgaacctag accaagatgt gagctgtttg ctaaaaactg ccagcccatg catttggcca
3721 gagcttgcac cgcatttatc tgatgttgat aaatctgaca aaaaattaga tccctcagct
3781 cctggggttc gtaactcata tgcatgactc taccatcgcg acatacgcac ttcaatgatt
3841 tttcaccgac gtgaacgacc attgtcgtcc gacatacgct gtcgtatcca tgcgtcaaaa
3901 tattaatttt tacacaggat tgtgtcggtg aatttaatgc gttccagtgt gaaacaataa
3961 gaggatcttt cacttccttc gctatcgtgt ctaatacgta ttccgtgcgc aaacgcatga
4021 aaaagtgttg cgcctgttga ataatctgtt ctaataacgt ttgactcttc gtcatttcta
4081 gaagctcgta tttatcagca gcagtagggc cagctaagta tcttcgttta ctaggcccta
4141 gtggacctga ggcaggatgg ggaaatggat gttgactatt cttataatgc acttcacgca
4201 acagttgatg taaagaatgt tctaacacat gatcgtgctc cgttttatgg ggcgacggtg
4261 caacaggttt cttatcgttg cctgtgctgt ggcatagacc aattatcaat tgaattccgg
4321 gaagtactgt ggccattatc tggttcccaa caaccatgtg aggtataggc gcgcgtaaat
4381 gcacggcctc ccgtgccaat tgactaaaca gttctttgca aaatagaacg ttttgtgcag
4441 cctctaactt ctgctgccaa tgcatatcgg cgtttgaatt attagtatta ctattaagca
4501 aacttatatt cgcactgcat aaatcttcgt gatctttctg acataatact tcaatatagg
4561 cgacaccttg caactcgcta ggtatagtca cacgtaaggc agataatttg gaatttgaag
4621 atatatgaga ttgtcctgac atattactac cagcgttagg ggatgccggt ggactgttac
4681 tatttttctc ttcttcttca gctttggtga cttcaaacat acccatttgt gtatactttg
4741 agccagcagt tcgataacta agatcaccaa tgatagaatt tgacactttc ttcaaacgcc
4801 aattttgccg taatcttaac aattcaatat gaaaatcagg agtggatttt gttctagcta
4861 attcagcttg acaatttcgt agtctctcag cacccagcat gagaactgat gctgctcctg
4921 ccaatgcctt ttttctagca tatacttgta tcataggctt tatttcgacc ggttcctgag
4981 gtactggatc taataccata taattttttt cttttgctat tgcaagtaca tcagccaata
5041 cacaaacttc tgtcaaggca ttccttaatt tattcctaac actatcccaa ggccataagg
5101 aggactgaaa tgaagtagaa tcttttgcat cctcgtcgcc tttttcatct tctaattgct
5161 ccttctttat ctcctcacca tttgttttat taaagtcaat cttttgagca attttcgcca
5221 agttctccga caatgtgagc ggcgcttgat aaacttcttg gccatcgtaa ctgatttcct
5281 gtatctgatt ttcaatcggc gcctctacag aaatgttcac ggaatacgcc attattgttt
5341 tcgtatatta ttatgaaggg atgacgttcg atcattgaac tctatagtat ataccagaca
5401 gcgac
//