LOCUS LI539127 4873 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33433.graph_c0_seq2.
ACCESSION LI539127
VERSION LI539127.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 4873)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4873
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33433.graph_c0_seq2"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1617 a 791 c 690 g 1775 t
ORIGIN
1 gtaatgggga gtaatcttta aatttggctg atgtaaaggc gcacatttct ccttaataac
61 atgcattgga tttgcagaaa tttgctgcta ttaatatttc aatttatcga taatttcgat
121 cgtcttaact gtttagttaa attgtttatt taaacgggta tactcaagta tatttagaaa
181 acgatcaata tcaataatta cagatatata taaatacttg tacattctac tcatcacaat
241 catcgatgag taaaccttaa acgaaaattc aaacaaccga atcaatttac gctatcttcc
301 tcgtgccgca cagacattct atcagaggat gcgttctcgt ctatatataa tgactccaaa
361 tgacgttgaa gcaggtagta tttgggatgc tagacaggcg tataataata tgctcgcaag
421 acgcagaaaa caggaggcaa tgagatcgat attttattac gcttcgcctc aagaatctta
481 cgatgaaaat gtggaattta ttcgcgaaca ccaacgtcaa accatatgac cgtatgactg
541 cagtatttac tctctgtttt ttgacaggtt gtgtatgaac tactctttta ttattataca
601 tcttctatca tacattttat acttattata ttatatatac catatgtata tatatatata
661 tttactattt atatttatta ctatgtttat attaaattta tataatattt ttagttatta
721 aatagtttta tagtgttgtt aaatattttt ttctttatca ttttatttag ttttatataa
781 gagttattat tatcaattat tttagagcta ccatatttat catccaataa ggtttacatt
841 aaattcatga acaggactgt tattattgca aatcaatata acgtctctgt taatctgtga
901 tattgctaaa gtcatagata caaaggtcta ttgctacagc tattaatagt tgtctacagc
961 taaagtattt tatgtacact agagtaaaaa ctcgatgtac aactttgaac tatcttaatt
1021 aatatctgaa caacgcaatc tgtctataaa ataaagtact tttctaacaa attttgctgt
1081 gcgtaacaac gataagaaaa atcgacattt aaagttatta ctctaaagta aatttaacat
1141 taatcaatta aaattaatta atttttgatc agaattaatt aatttaatta attgattaat
1201 tagaatttta actttataat tagttttaaa ttacttttta aaaaatttat tatttttatt
1261 acaaaatata attctaataa aagatgaatt taaatttaat tatattattt aaatttctat
1321 tcttctattt tatgattttt ccattgtttt ttcgaaaaat ttcattccaa taaataaaat
1381 ttttgatatt gctaaattta aagaaagttt aattaaatct taaattttaa taatagaacg
1441 aataacatat gtaaataaca aaaatatgta aataataaat tggtattctg ataaattaat
1501 tgaaaaaaat tttaatgaca aaatctaaga ttttattaaa agtatcaaat tatttgatat
1561 tcacaatatt aaataatttg tttaaaagaa aatctaagat ttttaaaaca tcttagattc
1621 ttttaattta ttctgcacgc gcactgttgt actattataa tataatataa gaatatatat
1681 aatagtataa taatattaac aatattaaaa tctgacactc gcctctttct acacacaaat
1741 atgatattta aatatattaa atatatcaac ttatatttat ataagtttat attaatatat
1801 aaatataata atatatattt gtgtatttat tatgtgtaag atttttggaa tttagcctta
1861 atatttttta ataaacaaat tgtacattaa gatcgatgat tatatttatg tatcacattt
1921 ttcatttcat tatttgttgt atctttaatc tctacaatca attgctttct ttgtaacaaa
1981 ttgtacaata atgtatatat tatatgttat atataataat aaatgtgtat ataaataaaa
2041 attttacaaa tgtaatataa gttcttagtt taattttatt atcaaagtgc tttatattaa
2101 aaataacaac atgaagttga ttagtaattt aaaatatatt aattaaaaat aatatacata
2161 tataattgcg aaacaaaatc aatgttataa tgtgtcatac ttattttaac tgtaactctt
2221 tttatattta taaaaagcgt tcagacacga ggtacatata tcaataataa agtattcata
2281 ttttgtttta tacgctttat actttactaa aaatgtaatt taaatagcta ttttagtatc
2341 tttcctaaag tgaaatctca agtctctctc tcaatctaaa gtcaaataaa atctcttatt
2401 ttcttgatcg tcaggatgaa tataagataa cttttctttt agtgtcgtca cacacaaata
2461 taacttgctt ttcgagataa aatgttatta tcttaattaa aaaattcaaa tttcttcaat
2521 aaaaagctgt gaaacatgga gagaataata atataacttc gtatacaaaa tcaccaaaat
2581 attatagcca taaaagcaat tctcaatttg tttttacttg tctataatta ctgtttactc
2641 tctcggatca ttatttttat aggagaaaca taaaaaagtg cattttagtt tatagttctc
2701 ttttcttatt ctaaattaat cgcgtgtgta acaacttctt actctatgca ttctaccatt
2761 aaaatatgtg agtggaaatg agtggaaaat gaagggaaaa tataaaaaaa tctttaaagt
2821 cccacaaaaa atatatagaa gtttcactgt aatttgcaac acttaagagc tcattaaaga
2881 agacattagt aattccatct tattgaggaa attttttcct tccatcttgt cccatctgac
2941 ttctttaaag gagcccccca gattctccca ttttctttct cgaacaagtt ggccaggaaa
3001 gaaatccttt cggggggaat gagcaatggc aacttgcacg cccgtttgtg gttcgcatcg
3061 tacagctatc attctgtcgc cgattggcga agctagaata caactactag catttccgag
3121 aggttccact gaacctagac caagatgtga gctgtttgct aaaaactgcc agcccatgca
3181 tttggccaga gcttgcaccg catttatctg atgttgataa atctgacaaa aaattagatc
3241 cctcagctcc tggggttcgt aactcatatg catgactcta ccatcgcgac atacgcactt
3301 caatgatttt tcaccgacgt gaacgaccat tgtcgtccga catacgctgt cgtatccatg
3361 cgtcaaaata ttaattttta cacaggattg tgtcggtgaa tttaatgcgt tccagtgtga
3421 aacaataaga ggatctttca cttccttcgc tatcgtgtct aatacgtatt ccgtgcgcaa
3481 acgcatgaaa aagtgttgcg cctgttgaat aatctgttct aataacgttt gactcttcgt
3541 catttctaga agctcgtatt tatcagcagc agtagggcca gctaagtatc ttcgtttact
3601 aggccctagt ggacctgagg caggatgggg aaatggatgt tgactattct tataatgcac
3661 ttcacgcaac agttgatgta aagaatgttc taacacatga tcgtgctccg ttttatgggg
3721 cgacggtgca acaggtttct tatcgttgcc tgtgctgtgg catagaccaa ttatcaattg
3781 aattccggga agtactgtgg ccattatctg gttcccaaca accatgtgag gtataggcgc
3841 gcgtaaatgc acggcctccc gtgccaattg actaaacagt tctttgcaaa atagaacgtt
3901 ttgtgcagcc tctaacttct gctgccaatg catatcggcg tttgaattat tagtattact
3961 attaagcaaa cttatattcg cactgcataa atcttcgtga tctttctgac ataatacttc
4021 aatataggcg acaccttgca actcgctagg tatagtcaca cgtaaggcag ataatttgga
4081 atttgaagat atatgagatt gtcctgacat attactacca gcgttagggg atgccggtgg
4141 actgttacta tttttctctt cttcttcagc tttggtgact tcaaacatac ccatttgtgt
4201 atactttgag ccagcagttc gataactaag atcaccaatg atagaatttg acactttctt
4261 caaacgccaa ttttgccgta atcttaacaa ttcaatatga aaatcaggag tggattttgt
4321 tctagctaat tcagcttgac aatttcgtag tctctcagca cccagcatga gaactgatgc
4381 tgctcctgcc aatgcctttt ttctagcata tacttgtatc ataggcttta tttcgaccgg
4441 ttcctgaggt actggatcta ataccatata atttttttct tttgctattg caagtacatc
4501 agccaataca caaacttctg tcaaggcatt ccttaattta ttcctaacac tatcccaagg
4561 ccataaggag gactgaaatg aagtagaatc ttttgcatcc tcgtcgcctt tttcatcttc
4621 taattgctcc ttctttatct cctcaccatt tgttttatta aagtcaatct tttgagcaat
4681 tttcgccaag ttctccgaca atgtgagcgg cgcttgataa acttcttggc catcgtaact
4741 gatttcctgt atctgatttt caatcggcgc ctctacagaa atgttcacgg aatacgccat
4801 tattgttttc gtatattatt atgaagggat gacgttcgat cattgaactc tatagtatat
4861 accagacagc gac
//