LOCUS LI538120 2488 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33599.graph_c6_seq26.
ACCESSION LI538120
VERSION LI538120.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2488)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2488
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33599.graph_c6_seq26"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 847 a 376 c 414 g 851 t
ORIGIN
1 acgcagagta catggggaca gccgtgtaga taaatgatag aaattgacag atgcagtgta
61 tttgtcacat aatacataat tgtgttttat tatatatcgg tcattaaatt tgtacaccat
121 atctcttcca tctaaatgta aagacgttaa ttcttgtaaa tgctctgtct aatatatcat
181 aatgataatt ttcgtaaaat taacactgtt gtcaaatttg atgtttgatt ctgcatttgt
241 attaaacaat cgctaaatcg aataaaaatt gcgagaggaa cgaagcttgg atataaataa
301 ctaatatata ttgcagactg cagatatgac gggcctgggc atggacttcg aggacgattt
361 cttcttcgag gaggataaaa tgttggttat ggaagattgc gaacattgat tgttacttag
421 ctgtataatt tgttacgctg ccgttacagt tttaatgtgc tttctttcct gatcataaca
481 tgcatgctcg aatgccacgg tgcggtggaa ccacagtttg acaagcgact cgaccttatc
541 aacgagtagt agcgcacttc aaaattcgag cggatcaacc tcggataaag tttctgttgc
601 tcttaccacc gtaccatcgg ctaacgtcga attgcaccaa ctagctatga tggaagatcg
661 catgtacgca ctattcttat gtcacagtta tattgatttt tttcttcttt cggcttcgcg
721 cgtacctctc ttcgtacaaa atttcaattc tttccttctg cattgtcgct tatcgtattg
781 ggatttagac cagacataga actggtcgca caagatcgat gtatacagca gaagcctgtc
841 aaccagatgt aagttttctt tagaattttt gttatcatag atatctatat catcaaatta
901 taatttatat aatgctgaaa atatttttta gtataaaaaa ctgatagaat atattagtat
961 gaacaagagc aattaatttt cctaacttga aaacaatttt atcaagattt aagattatat
1021 agcacattag tatttatgta atttcaaata atactaattt ttcttgaaga aaaaatacag
1081 gttttacatt tatggtataa atattgtttt catataaatg tataattata tatgaaatat
1141 ataatttcat ttatatagat atacgtacat gtaatacgta tttaaattta tgatgaacaa
1201 acattgtgca ggataacaaa cttgcattaa atgcgtattg aaaagattca aaatatttca
1261 catatattta aatcagtaaa taaattaaaa tcagtaatta atcagatgtg tagtacacaa
1321 ttttgtcaca attcaagact aatgtcttaa gacttgtgaa atattttatg tacataaaac
1381 attttatgta tttcgaatta gattatcctt tgaaatatct aaataaattt aatatatcac
1441 attgttacac agatatttgc aaaataagtc tatacgaaaa aatcaagaag ggactttagt
1501 ttaattaata tcagaatgat aaattgttac tttgcacaat gttcgctgtg ctcccattca
1561 cgacagccgg gaaagattgt attactcttg ttttcgtttt ccaattaacc ggcgtcaagc
1621 gctttttttc gtacgccacg aaaaggcatt gagaagctga atagaagagc aaagcgtatg
1681 agtgcattaa atatgaaatc gagagcggga aggaagagag agaatgtatt tgtgtgtatg
1741 tgtgtgtgtg tacgtgtgta tgtgagtgca tgtatattct taaaatattt atcacttaag
1801 atttatatca aacaatcgcc gagaaaattg gtgtaatcca agacgattat gttttctatt
1861 taattctttc tttcgtttac ttatatttct taagtcatgc cagttaattg attcgtaatg
1921 taagtataag tcatgacatt ttattattat aataagggta acgtttcttt gtcgaaagcg
1981 ctatggagaa tctgtttaaa tatccttcga ttaattccca tttgaatgat ttcaagttta
2041 caccctttac acgcaggatc tcattttcgc gcatatctgc gtgaaatcaa tgcagaatta
2101 cgaattattt cgtagaccat gttttcaggt tgatatcgac aaaattatcg aaattacgtg
2161 atatcgttta attgggccgt ctaggcgatt tgctagaatg tgtcgccaag caatacagag
2221 ctctaaatag ctctttcatg aaaatatttc tcacgatcaa gcgaaagatt agatagctgt
2281 ctctgcaaaa tacagcgact gccattagca acgacattac tattaacttc agaaattcat
2341 tcaattaact aagggattcg atcgtagtat tttaagcatt tattacaata tgtacatata
2401 ataactcgtg ttatacatat aaattgtaca aaaagatatc cgactgaaaa taaatgaaac
2461 taaaagcgga aaaaaaaaaa aaaaaaaa
//