LOCUS LI536546 4447 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33604.graph_c1_seq7.
ACCESSION LI536546
VERSION LI536546.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 4447)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4447
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33604.graph_c1_seq7"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1393 a 786 c 910 g 1358 t
ORIGIN
1 gagttacacc tagatacatg tacatctaga cttttaatta aatgttatgt cacctaatga
61 tgctgtgata agcgaagcgg ttatatcttg cgattacttg gatctctttc gactgcgaga
121 cgaacgagat gggtttgctt acggatccta gagctggaac tggcaagctc ataaaattat
181 tgttaagatt ggagaaaccg ttgtgcttcg cattatacgc gggaggaatt gtatggctaa
241 ttctcttggc tttaccggca tttaacgata atacctactt ttctgagaat gctttgctgc
301 ctggattagt tacgaaggag agtaatttgg aacagacgtc aaagcaatac tattatgatc
361 taattcacga aatgaagaga tatccagata gtatgcctta cgcatggctt tcggcaaaat
421 tcagccagct tcatttggat gtatttgtac ataatttctc cttgatttac ccattccaag
481 aacaaaagtt tgtaggacaa aatatatacg gcattgttag agctccacgg gcatccagta
541 ccgaagctat tgtagtcagt gtaccatata gacctattaa cagcatttat ctagatactg
601 caccttcggt agcgctgtta cttgcgtttg cgaaattttg cagaagacaa aaatattggg
661 caaaagatat aatatttctt gtaacagaac acgagcagtt gggtatgcag gcatggctag
721 atgcatatca tggagttact agtggccaag agggaatctt gatagcagga gatttatcag
781 gaagagctgg atctattcag gctgctatca atttggaatt tcatgcaatg aaaattacat
841 cgattgacgt caagatagaa ggactgaacg gacaactacc caatttagat ctttttaatt
901 tagcacaaaa tatgatagcc aaagaaggaa ttcgacagtc tttccaacgt cgatttgatg
961 ttaattatag ggataaatta aaaagttggg gatatcattt taatacatta atgagtatgg
1021 tagcaacaca agccactggt attccgactg gtaatcatgg actcttccat agatttggca
1081 tagaagctat tacattagaa ggtttccaaa aatctggcaa agagacggaa gcaaattttt
1141 atcaagtagg acgcgtagtg gaaagtatag tgcgatcact caataattta ttagaacgtt
1201 ttcatcaatc atacttcttc tatctattgc cctctaccga tcgatatatt tccattgggt
1261 tatatatgcg acctttggta ctgataatcg ctagtgtatt tataaaggca ttttctattt
1321 ggcaaagact gcagacatcg agtaactcaa atgagacgaa aaaggacaag caaaattcgt
1381 cgaacaaggt acttttaaaa ttcttaaata agattaaatt tccttatttt taatatatta
1441 gcaccaaaca aattctgtat tcttagtatt ttccttcagt aacgattcta ttccaatgac
1501 acatgaactg caaaatgaaa atgtcatttt gattatgaca gaatgacatt tctgcacatt
1561 aagttaagta gcaaatataa agtagtggaa gagcaatgca ggagaaggtg ctaaagatac
1621 agagatgaat aaggatgcta aaaataggga aatttgacta tattcagctg acatacattt
1681 tttatcttaa aaatgttttc attttttgca cagattgaag aatttgatat tggaggcgtc
1741 gcttccgaag tgttgtgggc acacatattt ggagtattaa taatggcttc tcctcgattt
1801 ttcactttaa tcggatcacg aatgttccat ctacgtacag aggattcctt atatgccagt
1861 ttcgccctta tcacgattct cacattgttg cggcgctttt atgctataat ataatttcta
1921 gatcgatcaa atacgagaat atatcgcttg tttgcgttat cgcgtcgatc gaactggcaa
1981 ctgcattaat gtgcatagct atgcataatt tttcattagc attattgacg gccgtcgtgt
2041 atgtaccggt tgtactatta ataacaccgc atcatgaatc tgcgtcgagg tgagaatcca
2101 gatcgattct gtttatttgg ttctgctgta aatactttta tctcaacaat taagcagtga
2161 tattttttgc tttatactca gcagattacg cggctgtcaa tacatcgcat ggatcctact
2221 acatccattc atcgcgtcgg cgatcgtcgt gatgggctac acgtatctca attttcctac
2281 cgatcctatc gtatctctgc ttctcagagg ctatcgcgct aacaagcaag cgctcgtatt
2341 cagtattgta gactctatga tatatggcaa ctggttttac aacgttacta ccgctgttat
2401 gttaccgata tggttgttgt tttggaatgt tatgcgttcc agcgccgcga taccctcgca
2461 ataaaacgat tgcataattc acagtccgaa tttacattaa tatttttcga gttgatcttg
2521 gacgatttgt tcaagcgcga tctttttaat aagtaaccat cagcttaacg ctcatcaatg
2581 agaacctggg gaaagttgct ttcgataatg caatcttttc gataaggatc tttaacaata
2641 agcaaaatag gaaaaaaaac gcttcgaaaa gagattattc tttcatgaga ttagatttct
2701 caataatacg tcagtcagta gatatagagt atcttccgat gataaccctc atggcactct
2761 tattgcgcgg attcgcttga ctagtttgga gcgtgcagcg acgtcgaacg ggtgtgatta
2821 ttctattaca tgaagtgttg acgtatttca cggaaacgaa gagaatgtaa cgtcttgaca
2881 gctgtgtaat acgaggattg cgtagggatt gcgttctacg tcgaggaaaa attgttggat
2941 tgttcaaacg cctgctgata cttgtctcac agagtaacat cttagacagc actgtaaata
3001 ctgatacaaa tcgcagtgaa tctcccacat acatgttaaa ggagagtata gaagtatatt
3061 aataacttaa ataataattt ttgttccaat caggccgtgg gtggcaacat aatgacaggt
3121 agtccaatat cagatttaaa tccaatcttc atggcggcag gtattaaatt aaatttatgc
3181 agtttaaagc gtggaagtag aacggtaccg atggatcata ccttctttgt tggatatcga
3241 cgtaacgttg ttttgcccga ggaagtatta gtctccatcg atattccctt cacagaagag
3301 aatcaatatt ttattgctta taagcaagcg aaaagacggg atgatgatat tgctatagtc
3361 aatatggcct tgaatgtaca cttcgttcct gaaagagata tagttcagga agcgcatatt
3421 gcgtttggtg gaatggctcc tacaactatt ttagcaaggc agacatgcca gaagataatt
3481 agaaaaaaat ggaataaatc aatcttggag gagatttatg attctttact cgaagaacta
3541 ccattagttg atgatgcacc aggaggaatg attaaatatc gtcgatctct cactctcagt
3601 ttattcttta aaggatttgt gcacatctcc atgaagttat cgaaaaatat ttcgaccgta
3661 gaatatttgc caaaggaact agaaagcgca tcagagtgtt tccattacaa agcgccaaag
3721 agctcacaat attatcaagt ggtacccaaa gaccaggaat catatgatct aataggacgc
3781 cctattgtgc atgctagtgc attcaagcaa gcaacgggag aagcgatata ttgcgatgat
3841 atgccgaaat atgcaaaaga attatactta acgttagttc tctccactag ggcgcatgca
3901 aaaattttga gaattgatcc taccaaggca ctatctatgg aaggagttgt ctcatttttc
3961 tcttcgaaag atatagcgga agagagaaga tgggtgggtc ctctatttca cgatgaagaa
4021 gtatttgtat cagaaaaggt tacgagccaa ggtcagataa ttggtgcaat tgttgctaca
4081 gatcaaataa ttgctcaggc cgcggcaaaa atggttgaag tagaatatga aaatatagaa
4141 cctattatca tatctatcga ggatgctatt gagcacaaat cattcttccc tggctttccc
4201 aagtgcatca ttaaaggcga tgcggagaga gctttcgagg aagcagatca tgttttagaa
4261 ggagaaatac gcataggcgg ccaagagcat ttttacttgg aaacaaacgc tactattgct
4321 gtacctcgcg aagaggatga attggaagtg ttctgttcct cgcagcatcc cactgagata
4381 caaaaattaa tcgctcacgt tttaaatatt cacataaata gaattaatgt tcgtgtgaag
4441 cgtatag
//