LOCUS LI527118 2504 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c33540.graph_c2_seq3.
ACCESSION LI527118
VERSION LI527118.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2504)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2504
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c33540.graph_c2_seq3"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 850 a 405 c 435 g 814 t
ORIGIN
1 atctcgggag agtatatgac tataatggtc tcaaacagcg gacatttacg tgtggtattc
61 gactttggtt tcgaacggca agaggtcata tttccgtaca aacatttcgg tttgggacag
121 tatcatgata tcaggatcgg ccggaaaaat tcaggcgcga ctctgataat gcaggttgat
181 aattacgaac cgagggagtt caattttaac ataaagaatt ctgcggacgc acaattcaac
241 aatatccaat acatgtacat cggcaagaac gagtctatga cggagggatt cgcgggttgc
301 atatcgagag tcgaattcga cgatatatat ccattgaagc tgctcttcca agagaatggg
361 cctattaacg tacgctcgct cggtactcca ttgaccgaag acttttgcgg agtcgagccg
421 atcacgcacc cgccgaatat cgtggagacg cggccgccgc cgcaggtgga tgaggaaaaa
481 gtgagagccg cgtacaacga gactgacaca gccattttag ggagcgtact agcggttatt
541 ctgattgcgc tcgtgattat ggcaatcctc ataggtagat atatgtctag gcataaaggc
601 gaatatttga cacaagagga caaaggtgct gagatagctc tggatccgga ttcagcggtt
661 gtacattctg ccaccggtca tcaagtccag aagaagaaag aatggttcat ctgaaatgct
721 gaaatgcatc acacgttaaa tatgtaagtg ctggaaagga gtacacatta acttaatcta
781 aaatattata cataaaacct tcttgataag ggtaatgtct tttttgctcc gttcaactgt
841 tatctctatt tacgttttat aattttgtat cagagacaca cgatgcgcgc atcatagcga
901 gatagaaacc aaaaaagagc tggccaactt gggagaatga acatttgaat tcctttcata
961 agactcgtaa cagctttatt aaattcaatc ataattttga tgagctatat attaattgta
1021 gtgtttgtac tttactgttg tttctattta aagtatttat caaaaattat ttttatgttt
1081 gatgtatcgt ccctctgtaa ggtagcagaa catagtttgt ccccaaaaaa attcaacaaa
1141 caccaaagaa aaatttgcca ctatctccaa tataattttt gcagtaatta aaacaatttg
1201 tgttgtactt tacgtggact actttgtata catttagtaa tagaaaagat aaattaagta
1261 cattaaaatt aagcttcata gaattaaatt tgaattttga ccaacctttg tggattttgt
1321 ctcattatgc ggcgttcata agactatcat tccatattat ttctcgcaac tcattacgat
1381 atcaataatt taaaatgaaa ggctctggta atttaatatg tcgatagagg agagacgggc
1441 taattaagag cctagcgcgg taattggtgc gcaaataatt tttttagtaa aatatcttta
1501 ttggatttcc ataaataatg tacgtttcgg ccctatgttt cggatcatct tcagcatcta
1561 taatatacag gctacgatca tgtgctcatc atagacatct ttacgatata acatatgact
1621 gctgaaattt caccaatttc ttttctcatc aattaccttt caaagaatga ttacggataa
1681 gaaattaatg attttcttgc gttacgtgcc aatgagaaaa agagaaaaat taattaacta
1741 taatatataa tttcactgga gtgtgtgtat cttatacgta acaatttata tgcgttttta
1801 tgatcgggca taaaagagag ttctatgtaa cataaataga ttctacatgt acaaagctgt
1861 ctctatttta caaaggtaga ttacttacat ttatatatat atatatagat atttttgttc
1921 tttctttttt cttatgacaa ttcacagtat tagttgtaat gtctaccgtc caaagtgcat
1981 ttaacacttt tttttagatt tattttattt tttcattcgt ttatatgatt atattttaca
2041 gatgtttact tttttttata tatatagatc tgcaaaaact cactgtagta atttaatatt
2101 aacatagcac taaggagata gtaattgtaa tagtaaataa taaaaacaaa aacaataatg
2161 ataatataat ataataatag taattgtata ctaagcattg ctaatgtaat acacaatgaa
2221 agtgtacata agtcattttt atacgaacag catactcgtg ttatttcttg ctattaaatc
2281 aatatctctt gtacaacgat tgctcaacag gcacgaaacc aacaaagatg cattcaacac
2341 atttctgtat gaacatatcg ctaatatgat attcaggctt gaaaaaaaac gataataatc
2401 tcaatgacaa tatatctttt ttttttatat atgagcatgt aaaagaggac aaaatcgatt
2461 aaaataaatc atctgtgacg ttctaaaaaa aaaaaaaaaa aaaa
//