LOCUS LI519396 4627 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c32586.graph_c0_seq5.
ACCESSION LI519396
VERSION LI519396.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 4627)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4627
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c32586.graph_c0_seq5"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 1603 a 710 c 766 g 1548 t
ORIGIN
1 ggttggcatc ctgacaacaa tggaatgtcg gccgtgcggg acacgagtac gagatcgcag
61 aattcataat tcgcgacgtg acaatcgcat cgaccgcatc ttttcgattg gcagcggata
121 aaggtgctcg cttctcatat cgtaagcatt cccgatgagc agcaccgatg tacttgaact
181 gtcatgtatt tcacgataaa tatttgagat aatgacggaa agataattcg ccgaagtctt
241 agacggtgga tggcacatcg cgcgagtacg agtcacatac gaacgatata agactagtat
301 gaatcatttt gatattgatt catgtgcatg tcggaagtgt tctaggcttt ttgaaaaatg
361 agtccgaaat tactacagcg gacagtcttg attaccgtta catacccatc acaaaaaaca
421 gtgttagttt gggcattaaa gccagccacg atgcaaggat tgccttacgg acacatcttg
481 gtggtgactc caatgtgtac gagattatta ttggaggatg gggaaatact atgtcagcaa
541 taaaaagaaa taatgcagaa ccagatgtag cagaagcaga tactagagat atattgaatc
601 ctgatgagat atgtgatatt tttatacaat ggtcttgcga tggattatta agtgttagcc
661 gcgaggatga ttttgacatg ccattcatgt cttatagaga cagaaaccca tttgttataa
721 attatatagg agttagtact gcttggggtg caactggaca atggataatc gaagaatgcc
781 agtttacgtc gccagccatc aggcagcaat tggtggacac gtgccacttc tgggtgaact
841 tcaacgaggc ttttggattg ccaccaaacg cggtaatggc ttccgaggat ggtttgtacg
901 tcggtcgggc gcatcaccaa agcaccgtga caccaggtgg catccgcgat aatatctgca
961 tgctagcgtg gggcggcgaa gcccacgaga aacgcgagtt ccaagtattg tgcggcaagg
1021 acgtgaattg ggtaaaatct tgggagggta gcgtgcctct gcacgccttg cctgcaggcg
1081 aaaccgagga cggttacgct ctatttatcg gcagggtgct acacgagggc gtttatcaca
1141 tcggcaagat acaaccgaat caccaggtgt gctacatacc gctgaacggc caggaaatgc
1201 cctatctgga gtatgaaact ttggtcatac acgacaatta cggaatcgaa tgtatcggaa
1261 gataaagtga caggcgactt aggaacagag cgtatttatt tttccacgag acatcgacga
1321 aatattttcc gcatgctata gttgtgaaga tgtgattctc tctataagat tttcattgca
1381 gttgcatata catacattaa taagagaata atataacttt tcttctttta tagataaatt
1441 tctttgagct aaagcaatat aaaaagattt aaaaatacgt gttttttttt tgctatcttt
1501 cataagataa aattagtgta atatatgtga tttcaattaa aattataaga gatgattcaa
1561 attgattcaa actaaaaaac aagttaattg taaattatgg aactcggtca gaattagagg
1621 aaattattta ccaatataaa taagtttact atttacaatt gattagtaaa gattaattca
1681 caaagatttg ttaataacag tgaatttatt attaaatacg ttagcgcgtg tgtgtatgga
1741 aatgtataga aatgaaataa tcaacatcat ttacgataat gattttccat acacatgaat
1801 atccataaaa aatatctgtc tttgaatttt gctcataata atattacaaa atattaactc
1861 tgtagctgtt gatgtataac tttatacaat tactatacaa tcgtatgtag atatactgca
1921 ttaaaagtga aattaataac aattaaaaga aattaatttt atttttaatc caatatatct
1981 attggaaaat aatataacaa tatatgtaat tgtacgataa ctatattata attatatata
2041 gctatgggat taattgtact ttgcagtact attataatta tcatagctca aagacacatt
2101 actttttaca gatgtgtaga aaattattat cataaatatt tgttatttca ttcttctaca
2161 aacgtcataa tgtatttaca accaatgtta ctcacaaatc tttgtgaatt aaaatctatt
2221 aatcagttgt gtgtaaacag ttaacaaata atacttgtgt cgactataaa actttgctaa
2281 agataaaaaa agaccaccga taaaagtgta ttttataatt tatcgcatcc tatattgata
2341 tatactatat attataataa gtaacattat tttgacataa ccgcgaaatt tacttttcgc
2401 atgagtacaa aaatgaagat atttaaagta ttctacaaag tattctgcta aatgtttttt
2461 ttatatgcca tacttattta tggattcttt aacagtatgt gaaactagtt atgtgtattt
2521 ctttaattta gtgactactc agggttttat aattaatccg caaatgatgg ccaatttaaa
2581 acataaaaca cagaatcgta atattttatc tataatattg tgatatgata ataaacgagt
2641 tgacaatgga atggcatgaa ccagaagaag catttgcatt tatttagact agtattaatg
2701 acaagagtat tctctatagc ttactatatt ctacagtatc tgtagcaaat gcttctattt
2761 gtatcaagca cttctttttt tttttttttt gctagacata tgctcagttg ttgaacactc
2821 gcatagaatg taattgttat tataagcaag gctgcacaag cctttctcct acagaataat
2881 tttatttatt gtagatgtta tttcaataac agcatcctct atttttctgt ttttattatt
2941 cgtgtataaa aatgtatgac ttttgtaata tattacaata agaaatgtgt aatgatatca
3001 aaatgtaaat ttttataaaa tacgtgctgc aatgattgct gtctaattat gtactgatag
3061 aatagcaaaa tttttttgaa atatctaatc atgtaatatc agttcaaaaa attttaataa
3121 tttttttata gttggaaaat tatagaagac aaaaatgtgt gaatatatat agtttgtaat
3181 ttggaacttt cttataatgc ttagaagata agaaaaattc tagaaagaat cctttaatag
3241 agataagcag aaatagcaag cgagctttcc atattaatct atattatgat tataattata
3301 tatcagaata ttttgcataa tgtaacaccg ttatatattt tagaaatatt agaaaaaata
3361 gaaaaaaaca ttgaaaaact tctgcgagca tgtgatagaa atattaattt tttcggttgg
3421 aaatatcttt ttggatatag atatactaga cactctgtat atttctcata actgtatagt
3481 acatatgcag taatataata ttttgttaat atcattgttg cataattaat aagttgttaa
3541 agcatatata tcttcccatt atgttataac atagaaattg tattaatttt ctggtaatat
3601 tctattactt ttatattata taattaaatt catgaaattt tcatataatg taacgtcttt
3661 cattatatga aaacaaaggc atacttattt ttgcatatta agcacagttt tattatcata
3721 tcgtgaatca ttatatatta acaaaatatt taattgaatt cttgatatct cagcgtctaa
3781 taaaaataaa attgtacaat taataattac tataggcaag taaaaaagca tttaaatagg
3841 caatttacag aaaaaattat taaaagaaaa gtaagaaata cttttgtgga aaatactttt
3901 acctaagttg aatggaatat tttgattctt gcaaatatag caacaaattc tgattccaca
3961 caatatgttc atttgtcaat taaatataac atcatatgta aagataatat tacatataaa
4021 ttgattggac taattatatg ataattgtgt caaagtcatc aatagaattt tgcatgtgac
4081 aaatatacat gtgacaaatg ctttactcac agtacttctt tcccttcccc tcaacaaatg
4141 ttccatatat cgtattactt attattaatt gcggtaaatg aactctctta aagccagccc
4201 tcttaaagcc aactctctta aagccagctc cttaaagcca gctctcttaa agccagcgta
4261 aacggctgtg tcggcgatta ggatgtatat tatatggagt gagaaaataa aattcgagaa
4321 aatgttcact gtcaaaacac ttatctgtgc tcgatatttc tgggtagctt ctctttaatc
4381 cctgcactcg gtatatccct gatttcgcag ctactcccaa gaacgtcgct ttgacctcgt
4441 tcgttatcac actaatcaca cacaaaacac accacgaaca ctatcacgta tttcgcgaaa
4501 cgtattttag cgatctatca cttatttgaa cgtgatttcg acgcacgacg ttggttttca
4561 gtaattactt aaagcactga tccactcgcg aattacacga ttacagcgac cgattattaa
4621 ctgactc
//