LOCUS LI509679 5959 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c30453.graph_c4_seq1.
ACCESSION LI509679
VERSION LI509679.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 5959)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5959
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c30453.graph_c4_seq1"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 2050 a 959 c 1032 g 1918 t
ORIGIN
1 gcagagtaca tggggagttg ttcacgggct tcactagtgt gcggacgtgc gtgagtggcg
61 agtgttcggc gtgttccctg tcacctacgg aggtcgcggt ttcgctaacg aacgccctac
121 cgtagcttcc atattcaatg tgtatggcga ttcagtttcc tggtgagtgc atcctcacat
181 acatggagtt tcagttggat agcgcagagt attgccaggc tcaacacaaa tagagagaca
241 cgccccatac tccctgacaa ttattagata ctcttagagc aaagagagaa gaaggataaa
301 gaaacatctt ggagggtgaa aaagaggata tttaaagtag aagaattatc acgcaccggg
361 gaagccagaa aaatcatcga ctagtcatca cgcaagacat atagaagaat ttaatagaaa
421 ttattaattt acattagtag atgtgcaagc atcgtagata ctgagcgcac ctggagtacc
481 cagtgccaaa taggtaatct tccgcgaatt atagttaaaa agtctcaagt aggaaggatc
541 aagcgcatat caacaccgcc taatgtaacg tagcccttac tctttcggcg aagttcgcac
601 cccgacaacc cttcctaaga tctacatgta aacccgtggt tctgtcctct gtaaaaaaat
661 aagattctat tagttaaatg agaaacaact ttataagact gacatttaat gggctaagtt
721 gtcaaatcca gcctttgtcg cttcgtatag tgtggcacac gtatgtgaga gactttaaaa
781 gacaagttat ataagatctt taagagagtt aaaaacaata aaagaaagaa ggcagataat
841 acaaccatct ctccatctta aggaggaaat gagcaacatg agggtgaagg atatcagacc
901 ggcgcccgcc gagattgaat acaaaaacat gaagttcctc attactgatc ggcccaatga
961 tcaaaccatc cctaccttta ttcaagaact gaaaaagcat aatgtaaagg aggtggtcag
1021 agtttgcgaa ccaacgtaca aagtcgagga actcaaatcg gaagggatca atgtgataga
1081 tttggtattc gacgatggta catttccacc gaacgaggta gtggatgaat ggttcgaatt
1141 gctaaaaaat cgattccgag aatcacctga cgcatgtgtg gcggtacatt gcgtcgcagg
1201 tctcggtaga gcaccggttt tggttgcaat agctctcatt gaactgggac tcaagttcga
1261 agatgctgtt gcccttatca gagagaaaag acgaggcgcc ataaacgcaa agcagttgac
1321 ttttcttgaa aagtatcgtc ccaagtctcg attgaagctc aagaatggac aaaaaaattc
1381 ctgttgcatc caatagatca aagaattttt caaagaagaa aaagagaaga gagaaaaatg
1441 ggaaggaaag tcactaattc acataccgat tgatataaat gtataggctt ttgcgcctga
1501 agacaagtgg catattgtag caaatctgtt ctgaatggcc tatcaatgga aatgcaatcg
1561 tgataaatgt caataaactt tgaggcactt ttttcgcact aatcatctat tctaaattcc
1621 tgaggcaagt cattaacatg tgaatatagc tttaaattgt tgctgattcc ttttataaaa
1681 attgtatact tatttttgat acttgatcga tattgaatac ataatgggac aaaaattaag
1741 ccttgaaatg gtaataactt ttttaaaaca tttgaaaatc gactacatta ttgtcattca
1801 gccttagtga tttctaaatt atgagatatt attcatacat gtgtgtaaat ttattgtgtg
1861 atatatcttt actttctttc ttgatgtacg caaaagataa aaacaagtaa acgcacacgc
1921 caaatatgat ttatttaatt caaaataaaa aatataggaa ttataactgt aattataatg
1981 aacatgtgca gtagtacatt atattggttt gttagtattt catcgagatg acaaattata
2041 ttgtgtttct gaaatatata tatagaagat atgtagaata tttttataat ttattggatt
2101 tttaccagat gtaatttaga aatttctaca ctgagtgatt gtaagctaca ttttagaatg
2161 aaataataag agtgctataa aaaagtaaat acgtttcttt acaaaatata aagatgtgta
2221 aaaatatctg aatcagaatt ttcatttctt tttaaactaa atatattaaa aaagctatct
2281 gccttgtgtg caaatatact gctctttaaa aagattttat atacattttc tgcaaaatgc
2341 aattagaata aaaaggtgtt ttttatacaa tgtattagtc gcaactttgc aaagtgtaag
2401 attccgaagt ataaagtata agaataattt ctgtgacgaa tcagaagaaa gcactatagt
2461 aaaagatgat caactttaca atgatgaaag agtaaactat tttaaacatt gcaattacaa
2521 aacttaatat tgcgatattg aatttgtata tatatttttt tcttttctca ttgcgaaatt
2581 atattataac taatattaat tctaattaat gaaacgttat taggtaaaaa tggttaatgt
2641 ttactactat aatattttga tacacttgcc acacaaatgt ttaatatgaa acatatgaat
2701 tacagcatat ttgagtgttg atgcatattt tggatctaaa agcaaaagtt tttaacttaa
2761 agaagaaaag ggaaacaaca cgtattgcgt tgcatttcca atggcatgcc gaattgctga
2821 tggatgttct taactcttat tggacttgga atctgcgtta acttgaaaga tgaataatga
2881 aaaaaaataa ctaatgtgaa gtaaatcaca cttttcagag ctgtatatca catttatcgt
2941 agctcgacgg caatttcacc aaaatccttg catatctaac ttttagttag aaatagattt
3001 ttcaatctga tacgagcatt ttatgtaaag tcattgtcgt cctcattttg gtaaaattgt
3061 cggtgatgct atacgccaca ctaaactgtg ttcaaaggat agaaaaattc attcgtaaaa
3121 taataacaaa tacaatactt agaacacatt tcacgcgcgt ctgctgattt catgtgaatg
3181 tacgtttttt caatgtacac tgttttgtac tcattgtctt tgttatgccg tctttgtttc
3241 taaccatcct gcttaacaat gaatccgttc cggaaatgaa atctacacac tgacggttgt
3301 gtagcaatcg agtctggtta atgtgtatca atatatccag ccatccaagc ttaattgcta
3361 tcggacaaga ccccactgtt gcatttcggt acatgacaac aattattgct tattgttaac
3421 aaaacgcgtt tgttaatcgt atatgcatac ctcttattcc aatgacaaaa tacgattgac
3481 acaataatcg attgataatc tgttacttat ttagctatca aacacacagg cgacaagaga
3541 ataatttaat ttctcaaacg taatttttaa cgagtgacaa taggatacat tcactacgat
3601 cgcagactcg aattgaaatt tgaacctggt gcatcttttt ttgtaatatt gaaaactgca
3661 atatttttta tcagaggatg ggacgagggt tattcataaa agtaaatgat cctagatgca
3721 aaagtatatt acttttatat agtttaatcc tagttcaatt ataataatta agataattgg
3781 gcatatatat atatatttat atatatatat atatcttttt tcaaattttt tcgtaagaca
3841 cgtcaatatt tgtgacaaaa taggtatgat cttaaaagtt accaatatga ttttcatcgt
3901 ttagcaatta cttttgcaca tcgattcact tcttcaagtt gtataaataa attgctacta
3961 taatacaaaa tgtctctttt tacatatact gtgatatgat ttttctttat atgcataaaa
4021 aaacagtgta gactgaggaa tagaatgaaa tgaagattgt ggttgttgaa gctgtgatcc
4081 caagggtaat gataacaatt ttatgtaaaa gattatgcat gttgctattt tatttcaaat
4141 taaatgttca attacaattt aacatatgaa aatcgttcca ctgtgcaata atgcttacat
4201 ataaacggta catacataca gaatatagaa tgttttattt ctcgaagaaa tgaatcgaac
4261 tgctgcaaaa attaatatta ctcgaagaaa caaatgcaat tatatagtta aataactttt
4321 ttaaatagct ttatgtgaat ctaattcata caataatttt atgtattgat aaagacctct
4381 tgcgtttaac aacttatcta atgtgaatat ttgaagcaag aacaatttag ataggaaaga
4441 aatcctctat tttgaaccgg cataataaaa taagaacaat tactccctac aaattgatta
4501 agcaacaaat aaaaaataac gagttagcgc aatttaaata aagattacta tttaatttct
4561 aaatgcaact tcctctacct gtcattatat acaattgcct tcaatgaaat taaacaaaat
4621 aaaattattt tgtttaagtt acattgtaaa caatattaat aataataaaa taaagagttg
4681 ttttgtgaaa aaaaaagaaa aaaacatttt atactatttc tcttatactc tgatgttgta
4741 ctgtgtaaaa atttaatttc taactttatt ctaggcaaat gatatctgtc ttgagcaaca
4801 cttctttcca aatattaagt aaagatatat aaaagaacat tattatcgta aaaaaaagcg
4861 tttataatat tatataaaca ctatattata gtgcatatat acagaaatgt ttaactatct
4921 cgtcatttct cttttaattt tttttttcaa gtttagactt ttctttaaca atacgtacac
4981 ggatatacat gattaagtat gaaatcaatt aaacatgtca aatcctggag gaggaaagtg
5041 gtcgtcgtcg ggcctacggc ggggcggcct ctgtggctcc aaatcgggtg gaccaaaggg
5101 atcgaatctt gcaccgggtg gtattgcacc tggcggcaat cttccaggta ctcctaaacc
5161 acttggtaag cgtccagttg ggggacgacc gctgaacgga tcgaatatca taccaccgcc
5221 ttgtccaaac ggatcaaggt ctctgacccc tactcttgca ggatcatgtt gcatacgcca
5281 tcgctgatct tgaagatatg ctgcttgcag tggatctcta cgtgttgaag tttcacttgt
5341 ttcagacgaa ggttggttgg atgtggttgt ttgagttgtt acttctttag tatttccaga
5401 atatattgcg tctacaaaat ctttttgtat gttatataaa attgtgcgat acgatggtat
5461 tacagtttct aaagacccgt gtagtgtaga cacagtctcc tcaataggaa actgaatatt
5521 agaaatagaa tcatcatggt atctcagcaa gtttaatagt aaatccgtat ccgacttgat
5581 tccaaggagt atatataatt tttcatcctt aatataacgt aatgcataat taagacgcga
5641 gttccaatct tttgggagca gttcagatcc tttctctgat gcgttaaaag ttttttcatc
5701 tccgatgccg atacaccgaa atccacactt tgtcaaaaac cagtgtataa ataagattat
5761 tacgtcttcc tttttatgga tttcatcgtg atgcagtttt tgcaaaagct cgaagccaaa
5821 cgtactagtc gcgtctgcca tcctgatatt caatgatgca tcagtttgca aatttttgac
5881 aagcacacgc cattactgac gttaactgcc tatattcaag ttgtagttga ccgtcggaag
5941 ttcgcatcaa aatttgaaa
//