LOCUS LC438379 3302 bp RNA linear VRL 18-MAY-2019 DEFINITION Rotavirus A RVA/Human-tc/JPN/KU/1974/G1P[8] VP1 gene for structural protein VP1, complete cds. ACCESSION LC438379 VERSION LC438379.1 KEYWORDS . SOURCE Rotavirus A ORGANISM Rotavirus A Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus. REFERENCE 1 (bases 1 to 3302) AUTHORS Komoto,S., Fukuda,S. and Taniguchi,K. TITLE Direct Submission JOURNAL Submitted (09-DEC-2018) to the DDBJ/EMBL/GenBank databases. Contact:Satoshi Komoto Fujita Health University School of Medicine, Department of Virology and Parasitology; 1-98 Dengakugakubo, Kutsukake-cho, Toyoake, Aichi 470-1192, Japan URL :http://www.fujita-hu.ac.jp/~virology/index.htm REFERENCE 2 AUTHORS Komoto,S., Fukuda,S., Kugita,M., Hatazawa,R., Koyama,C., Katayama,K., Murata,T. and Taniguchi,K. TITLE Generation of Infectious Recombinant Human Rotaviruses from Just 11 Cloned cDNAs Encoding the Rotavirus Genome JOURNAL J. Virol. 93, e02207-18 (2019) REMARK DOI:10.1128/JVI.02207-18 COMMENT FEATURES Location/Qualifiers source 1..3302 /collection_date="1974" /country="Japan" /db_xref="taxon:28875" /host="Homo sapiens" /isolation_source="stool" /mol_type="genomic RNA" /note="genotypes: G1-P[8]-I1-R1-C1-M1-A1-N1-T1-E1-H1" /organism="Rotavirus A" /segment="1" /strain="RVA/Human-tc/JPN/KU/1974/G1P[8]" CDS 19..3285 /codon_start=1 /gene="VP1" /product="structural protein VP1" /protein_id="BBH55847.1" /transl_table=1 /translation="MGKYNLILSEYLSFVYNSQSAVQIPIYYSSNSELETRCIEFHAK CVDNSKKGLSLKPLFEEYKDVTDNATLLSILSYSYDKYNAVERKLVSYAKGKPLEADL TANELDYENNKITSELFQSAEEYTDSLMDPAILTSLSSNLNAVMFWLERHSNDIADAN KIYKRRLDLFTIVASTINKYGVPRHNEKYRYEYEVMKDKPYYLVTWANSSIEMLMSVF SHEDYLIAKELIVLSYSNRSTLAKLVSSPMSILVALIDINGTFITNEELELEFSDKYV KAIVPDQTFDELQEMINNMKKIGLVDIPRMIQEWLIDCSLEKFTLMSKIYSWSFHVGF RKQKMIDAALDQLKTEYTKDVDDEMYNEYTMLIRDEIVKMLEIPVKHDDHLLRDSELA GLLSMSSASNGESRQIKFGRKTIFSTKKNMHVMDDIAHGKYTPGVIPPVNVDKPIPLG RRDVPGRRTRIIFILPYEYFIAQHAVVEKMLLYAKHTREYAEFYSQSNQLLSYGDVTR FLSSNSMVLYTDVSQWDSSQHNTQPFRKGIIMGLDMLSNMTNDPKVVQALNLYKQTQI NLMDSYVQIPDGNVIKKIQYGAVASGEKQTKAANSIANLALIKTVLSRIANKYSFITK IIRVDGDDNYAVLQFNTDVTKQMIQDVSNDVRYIYSRMNAKVKALVSTVGIEIAKRYI AGGKIFFRAGINLLNNEKRGQSTQWDQAAILYSNYIVNKLRGFETDREFILTKIIQMT SVAITGSLRLFPSERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQKSGI ADEIASSQTFKNYVSKLSDQLLVSKNVIVSKGIAVTEKAKLNSYAPIYLEKRRAQISA LLTMLQKPVSFKSNKITINDILRDIKPFFVTTEDNLPIQYRKFMPTLPDNVQYVIQCI GSRTYQIEDSGSKSSISKLISKYSVYKPSIEELYKVISLREQEIQLYLVSLGVPLVDA STYVGSRIYSQDKYKILESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVT FILHLYAKLEIINYAIKNRAWISVFCNYPKSEMIKLWKKMWSITALRSPYTSANFFQD " BASE COUNT 1237 a 478 c 566 g 1021 t ORIGIN 1 ggctattaaa gctgtacaat ggggaagtac aatctaatct tgtcagaata tttatcattc 61 gtttataatt cacaatctgc agttcaaata ccaatctatt attcttccaa ttctgaatta 121 gaaacgagat gcattgaatt tcatgccaaa tgtgttgata attcaaagaa agggttatca 181 ttaaaaccat tatttgagga atataaagat gtaacagata atgcgacttt attatccata 241 ttatcatatt cgtatgataa atataatgct gtagagcgga aattagttag ttatgctaaa 301 ggtaaaccac ttgaagctga tttaacagca aacgaacttg attatgaaaa taataaaata 361 acttctgaac tatttcagtc agccgaagaa tacactgatt cattaatgga tcccgccata 421 ttgacttcac tatcttcaaa tttaaatgca gttatgtttt ggctagaacg acattcaaac 481 gatattgctg atgcaaataa aatttataaa cgcagattag atttatttac tatagtagca 541 tctacaataa ataaatatgg ggtaccgaga cataatgaga aatacagata cgaatatgaa 601 gtaatgaaag ataaaccata ctatttagtg acttgggcta attcgtccat agaaatgctt 661 atgtcagtat tttcacatga agattatcta atagcaaaag aattgattgt tttatcatat 721 tcaaataggt cgacattagc taaattggtt tcatctccaa tgtctatatt agttgcattg 781 atagatatta atggtacatt cattacgaat gaagagttag agcttgaatt ttcagataaa 841 tatgttaaag caattgtacc tgatcagact ttcgatgaat tgcaagagat gattaataat 901 atgaaaaaaa ttggtttagt agatatacct aggatgatcc aagaatggtt aatcgattgc 961 tcattagaga aattcacgct gatgtcaaaa atttactctt ggtcattcca tgttggattt 1021 agaaagcaga aaatgattga tgcggcgtta gaccaattga agacggaata tactaaggat 1081 gtggatgatg aaatgtacaa tgaatacact atgttaatta gagatgaaat agtgaaaatg 1141 ttagaaattc cagttaaaca tgacgaccat ctacttcgtg attcagaact agctggattg 1201 ttatcaatgt catcagcttc aaatggtgaa tcaagacaaa tcaaatttgg tcgcaaaaca 1261 atattttcaa ctaagaagaa tatgcatgtg atggatgata tagcacatgg aaagtatact 1321 ccaggtgtta ttcctccagt gaacgtagat aaaccaattc cactaggtcg tagagatgtt 1381 cctggaaggc gtacgagaat tatattcata cttccatatg agtattttat tgcacaacat 1441 gctgtggtag aaaagatgct attgtatgca aaacatacta gagaatatgc ggaattctat 1501 tcacagtcaa atcaattgtt atcatacggt gatgttacga gatttttgtc cagtaactct 1561 atggttttat atacagacgt ttcacaatgg gactcgtcgc agcataacac acagccattc 1621 aggaagggaa taattatggg tctagacatg ctatctaata tgactaacga tccaaaggta 1681 gtacaagcat tgaatttata taagcaaaca caaattaacc ttatggattc atacgttcag 1741 ataccagatg gtaacgtaat caaaaagatc cagtacggag ctgtcgcttc aggagaaaaa 1801 caaactaaag cagctaattc catagctaac ttagccctta ttaaaacagt actatcaagg 1861 attgcaaata aatactcttt tataactaaa ataattagag tagatggtga tgacaattat 1921 gcagtattac aatttaatac tgatgtcaca aaacagatga ttcaagatgt gtctaatgac 1981 gtgagatata tatattctag aatgaatgca aaagttaaag cactagtgtc gacagttggt 2041 attgaaatag caaaaagata catagctgga ggaaaaatat tctttagagc tggcataaat 2101 ttattaaata atgaaaaacg tgggcagagt acgcaatggg atcaagcagc tattctatat 2161 tcaaattaca ttgttaacaa attacgagga tttgagactg atagagaatt tatattaact 2221 aaaattatac aaatgacttc cgtagccatc actggatcgc taaggttatt tccatcagaa 2281 cgagtattaa ctaccaattc aacgttcaaa gtatttgatt cagaagattt cattatagaa 2341 tatggaacaa ctgatgatga agtgtatata caaagagcat tcatgtcatt gtctagtcag 2401 aaatcgggaa tagctgatga aattgcctct tcgcaaacat ttaaaaatta tgttagtaaa 2461 ttatctgatc aattattagt atcaaaaaat gtaattgtat ctaaaggtat agcagtaacg 2521 gagaaggcta aattgaattc atacgcgcca atatatttag aaaaacgtcg tgcgcaaata 2581 tcagcgttat taaccatgtt gcagaaacca gtgtcattta aatcaaataa aattactatt 2641 aatgatattc tacgtgatat aaaaccattc tttgtcacta ctgaagataa tttaccaatt 2701 caatatagaa aatttatgcc tacattgcca gataatgttc aatacgtcat acaatgtata 2761 ggatcaagga catatcaaat agaagatagc ggatcgaaat cgtcaatttc aaagttaata 2821 tcaaaatatt cagtttataa accatcaatt gaagagttgt acaaagttat atctctaaga 2881 gaacaagaaa tacaattgta tttggtgtca ttaggagttc cattagttga tgcgagtaca 2941 tatgttggat caagaatata ttcacaagat aaatataaaa tattagaatc ttatgtatat 3001 aacttactat caattaatta tggatgctat caattattcg atttcaactc tccagatcta 3061 gaaaagctta tacgaattcc ttttaaaggc aaaataccag ctgtaacgtt catattgcat 3121 ctttatgcta agttagaaat aataaattat gctataaaga atagagcttg gattagtgta 3181 ttctgtaatt atccaaaatc tgagatgatt aagttatgga agaaaatgtg gagcataaca 3241 gcactacgat cgccctatac tagtgcgaat ttctttcaag attagaacgc ttagatgtga 3301 cc //