LOCUS LC429598 1241 bp DNA linear PLN 05-JAN-2019
DEFINITION Vitex rotundifolia chloroplast HIRO:HIRO-MY 134861 gene for
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial cds.
ACCESSION LC429598
VERSION LC429598.1
KEYWORDS .
SOURCE chloroplast Vitex rotundifolia
ORGANISM Vitex rotundifolia
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Viticoideae;
Vitex.
REFERENCE 1 (bases 1 to 1241)
AUTHORS Tsubota,H. and Ikeda,S.
TITLE Direct Submission
JOURNAL Submitted (17-OCT-2018) to the DDBJ/EMBL/GenBank databases.
Contact:Hiromi Tsubota
Hiroshima University, Graduate School of Science, Miyajima Natural
Botanical Garden; 1156-2 Mitsumaruko-yama, Miyajima-cho,
Hatsukaichi, Hiroshima 739-0543, Japan
URL :https://www.digital-museum.hiroshima-u.ac.jp/~museum/
REFERENCE 2
AUTHORS Tsubota,H., Kitamura,Y., Ueda,M., Ikeda,S., Kubo,H. and Nehira,T.
TITLE Notes on alien plants in Hiroshima Prefecture, SW Japan: 9. A
naturalized shrub Vitex negundo var. incisa (Lamiaceae) newly
confirmed on Miyajima Island
JOURNAL Hikobia 17, 329-336 (2018)
COMMENT
FEATURES Location/Qualifiers
source 1..1241
/collected_by="Hiromi Tsubota"
/collection_date="2018-08-10"
/country="Japan:Hiroshima, Hatsukaichi, Miyajima Island"
/db_xref="taxon:413484"
/identified_by="Hiromi Tsubota"
/lat_lon="34.28 N 132.29 E"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Vitex rotundifolia"
/PCR_primers="fwd_name: HrL1, fwd_seq:
atgtcaccacaaacggagactaaagcagg, rev_name: rbcL1301RL,
rev_seq: cttcattacgtgcttgtacacaagcttcta"
/specimen_voucher="HIRO:HIRO-MY 134861"
CDS <1..>1241
/codon_start=2
/gene="rbcL"
/product="ribulose-1,5-bisphosphate carboxylase/oxygenase
large subunit"
/protein_id="BBG67172.1"
/transl_table=11
/translation="VGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAG
AAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVLGEKDQYICYVAYPLDLFEEGS
VTNMFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLL
GCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKA
QAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRD
NGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGEREITLG
FVDLLRDDFIEKDRSRGIYFTQDWVSLPGVIPVASGGIHVWHMPALTEIFGDDSVLQF
GGGTLGHPWGNAPGAVANRVA"
BASE COUNT 336 a 243 c 301 g 361 t
ORIGIN
1 tgttggattc aaagcgggtg ttaaagagta caaattgact tattatactc ctgaatacga
61 aaccaaagat actgatatct tggcagcatt ccgagtaact cctcaacccg gagttccgcc
121 tgaagaagca ggggccgcgg tagctgccga atcttctact ggtacatgga caactgtgtg
181 gaccgatgga cttaccagcc ttgatcgtta caaagggcga tgctaccaca tcgagcccgt
241 tcttggagaa aaagatcaat atatctgtta tgtagcttac cctttagacc tttttgaaga
301 aggttctgtt actaacatgt ttacttccat tgtaggaaat gtatttggat tcaaagccct
361 acgtgctcta cgtctggaag atctgcgaat ccctcctgct tatattaaaa ctttccaagg
421 cccgcctcat gggatccagg ttgagagaga taaattgaac aagtatggtc gtcctctgtt
481 gggatgtact attaaaccaa aattggggtt atctgctaaa aactatggta gagcagttta
541 tgaatgtctt cgcggtggac ttgattttac caaagatgat gagaacgtga actcccagcc
601 atttatgcgt tggagagatc gctttttatt ttgtgccgaa gcaatttata aagcacaggc
661 ggaaacaggt gaaatcaagg ggcattactt gaatgctact gcgggtacat gcgaagaaat
721 gatcaaaagg gctgtatttg ctagagaatt gggagttcct atcgtaatgc atgactactt
781 aacaggagga ttcactgcaa atactagctt ggctcattat tgccgggata atggcttact
841 tcttcacatt caccgtgcaa tgcatgcagt tattgataga cagaaaaatc atggtatgca
901 cttccgtgta ctagctaaag cgttacgtct gtctggtgga gatcatattc acgctggtac
961 cgtagtaggt aaacttgaag gagaaagaga aattacttta ggctttgttg atttgctgcg
1021 tgatgatttt attgaaaaag accgaagtcg cggtatttat ttcactcaag attgggtctc
1081 tctaccaggt gttattcccg tggcttcagg gggtattcac gtttggcata tgcctgctct
1141 gaccgagatc tttggggacg attccgtact acagtttggt ggaggaactt taggacatcc
1201 ttggggtaat gcgccaggtg ccgtagctaa ccgagtagct c
//