LOCUS LC382468 1952 bp RNA linear VRL 08-MAY-2018
DEFINITION Prunus necrotic ringspot virus Acot genomic RNA, segment RNA3,
complete sequence.
ACCESSION LC382468
VERSION LC382468.1
KEYWORDS .
SOURCE Prunus necrotic ringspot virus
ORGANISM Prunus necrotic ringspot virus
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
Martellivirales; Bromoviridae; Ilarvirus.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Noorani,M.S. and Khan,J.A.
TITLE Direct Submission
JOURNAL Submitted (30-APR-2018) to the DDBJ/EMBL/GenBank databases.
Contact:Md Salik Noorani
Jamia Millia Islamia, Department of Biosciences; Maulana Mohammad
Ali Jauhar Marg, Jamia Naga, New delhi, Delhi 110025, India
REFERENCE 2
AUTHORS Noorani,M.S. and Khan,J.A.
TITLE Complete genome organization of PNRSV infection apricot in India
JOURNAL Unpublished (2018)
COMMENT
FEATURES Location/Qualifiers
source 1..1952
/collected_by="Md Salik Noorani"
/collection_date="2015-05-17"
/country="India"
/db_xref="taxon:37733"
/host="Prunus armeniaca"
/isolate="Acot"
/isolation_source="apricot leaf"
/mol_type="genomic RNA"
/organism="Prunus necrotic ringspot virus"
/segment="RNA3"
CDS 177..1028
/codon_start=1
/product="movement protein"
/protein_id="BBD96253.1"
/transl_table=1
/translation="MAGVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMKALPT
KGCHILHLVNLPKSNILRLASKEQKGFLSRQADKVKKKIYRCVGRVFLVYVPIIQATT
SGLITLKLQNSDTGEISDVVTDVEVNRAFVIMDRWGRSLVESADLNLLYSISCPDVRP
GARVGEMMVFWDERMSRQQTYLEKGNPILFPIAETKPSKYLNDKKVLMSMVRSRILAG
TEGCDIAPENIEVKRLGDNRKVLTIQPKAPIVEEIKNDVEPLGSNGENHMEEKTVTVK
VGSSGSA"
CDS 1104..1784
/codon_start=1
/product="coat protein"
/protein_id="BBE00783.1"
/transl_table=1
/translation="MVCRICNHTHAGGCRSCKKCHPNDALIPLRAQQRAVNNPNRNRN
PNRVSSGVGPAIRPQPVVKTTWTVRGPNVPPRIPKGYVAHNHREVTTTEAVKYLSIDF
TTTLPQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVDQPDGPNALSRKGFLKDQPR
GWQFEPPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLL
VDEDLLEI"
BASE COUNT 521 a 389 c 507 g 535 t
ORIGIN
1 gttttaacct aattgaaatc gtaacatcca gtaattggtt gatttctctt ttacttgact
61 aggtaccatt gaaacgaatt aaaagtccta tttctctagt aacatcccct ttgtgggttt
121 agagattgtt ggttgtctat tcgtaattcc acttgttggt tgaatagtgt ttcagtatgg
181 ccggtgtcag taaaaacccc tccactagtg atttttcagt agtggagtgt tctatggacg
241 aaatgagcca gatatcagag gatttgcaca aacttatgct gtccgatgag atgaaggcgt
301 taccaacgaa aggttgtcat atcctgcatt tggttaacct cccgaaatcc aatatattga
361 gattagcgag taaggagcag aaaggtttcc tctcgcgaca ggccgataaa gtaaagaaga
421 aaatttacag atgtgtaggc cgagtattcc tcgtttatgt accgatcatt caggcaacga
481 cctcgggtct gataaccctc aagttgcaaa actccgatac aggagagatt tcagacgtcg
541 tgacagacgt cgaagtcaat cgcgcctttg ttattatgga cagatgggga agatccctgg
601 tggaatcggc agatttgaat ctgttgtatt ccatttcatg tccagacgtc cgacctggag
661 ccagagtggg agagatgatg gttttttggg acgagaggat gtcgaggcag cagacttact
721 tggagaaagg gaatcctatt ttattcccga ttgccgagac aaaaccttcg aaatatctta
781 atgataagaa ggtgttgatg tctatggtcc gaagtaggat actggcaggt acagaagggt
841 gcgatatagc tcccgaaaat atagaagtca aacgattagg ggataatagg aaggttttga
901 ctattcaacc gaaagccccg atcgtagagg aaattaagaa cgatgttgaa ccgttaggtt
961 cgaatggtga aaatcatatg gaagagaaga ctgtgaccgt taaggtcggt agttctggaa
1021 gtgcttgagt gactatgtca cgagcgtgcg ctttgcgcga acgtttttct tttctttctt
1081 ccgaacatct cttttatttg ataatggttt gccgaatttg caatcatacc cacgctggtg
1141 gatgccgttc ttgcaagaag tgccatccga atgatgctct gatcccactc agggctcaac
1201 aaagggctgt gaataacccg aataggaata ggaacccgaa tagggtttcg agcggtgttg
1261 gacctgcgat ccgaccgcaa ccggtcgtga agaccacttg gaccgtgagg ggtccgaatg
1321 tgcctccccg aattcctaag ggttatgtag cacacaatca ccgagaggtg acgacgacag
1381 aggcagtgaa gtacttgagt attgacttca cgaccactct ccctcagttg atgggtcaga
1441 atttgacctt attaactgtt atagtccgaa tgaactctat gagttcgaat ggttggattg
1501 ggatggtgga ggactataag gtggatcaac ctgatggtcc gaatgccctg tctaggaagg
1561 ggttcttgaa ggaccaaccg agaggttggc agttcgaacc tccctccgat ttagatttcg
1621 acacttttgc gcgtacgcat cgtgtcgtca tcgaattcaa gaccgaagtg cccgctgggg
1681 ccaaggtctt ggttagggat ttgtacgtag tggtaagtga cttaccacga gtgcagattc
1741 cgactgatgt cttgctggtc gatgaagacc tgcttgagat ctagagtgag ataagcacac
1801 tcgaatttct ccgaatggaa agttcgtacc accgatagtg gatattgcga attagatttc
1861 tgaaagtcgc ttcccggctt tcatgcttgg aaatcttacc tgcgttagca gatgcccaca
1921 acgtgaagtt gtggatgccc cgatagggaa gc
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