LOCUS LC382467 2591 bp RNA linear VRL 03-MAY-2018
DEFINITION Prunus necrotic ringspot virus Acot genomic RNA, segment RNA2,
complete sequence.
ACCESSION LC382467
VERSION LC382467.1
KEYWORDS .
SOURCE Prunus necrotic ringspot virus
ORGANISM Prunus necrotic ringspot virus
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
Martellivirales; Bromoviridae; Ilarvirus.
REFERENCE 1 (bases 1 to 2591)
AUTHORS Noorani,M.S. and Khan,J.A.
TITLE Direct Submission
JOURNAL Submitted (30-APR-2018) to the DDBJ/EMBL/GenBank databases.
Contact:Md Salik Noorani
Jamia Millia Islamia, Department of Biosciences; Maulana Mohammad
Ali Jauhar Marg, Jamia Naga, New delhi, Delhi 110025, India
REFERENCE 2
AUTHORS Noorani,M.S. and Khan,J.A.
TITLE Complete genome organization of PNRSV infection apricot in India
JOURNAL Unpublished (2018)
COMMENT
FEATURES Location/Qualifiers
source 1..2591
/collected_by="Md Salik Noorani"
/collection_date="2015-05-17"
/country="India"
/db_xref="taxon:37733"
/host="Prunus armeniaca"
/isolate="Acot"
/isolation_source="apricot leaf"
/mol_type="genomic RNA"
/organism="Prunus necrotic ringspot virus"
/segment="RNA2"
CDS 27..2426
/codon_start=1
/product="replicase P2"
/protein_id="BBD96252.1"
/transl_table=1
/translation="MNPLNQLLSHGCSAISSALHRDVAYTQISDECFDSHFTQISTEY
FLTTSARKLFEAYMVTMFLKKHMSYVFEDFIGSEMGPYVQTRWRIVFDLDEVEEEYVY
KPDFYHYDVYDYEMGVDIPASIMDDIPFCEDAEAVTCRNCGSFDEIETVYQAATSSDE
SCANVCDVDAPHDTIKWSDEPDLTVDDLSKLHDLDDEVPQLQLETVGRVVQSVEPLVP
DINSFETNQLHLVKEVVLDRFESILECHEKVLARNDWKSLAMYVPTGEIPSVSDILEI
PVKHTQPEFIQMAIDEMLPGVSDLDDRFFQEIVETSDINLEIDRASIDMSVFNDWTPK
SGRLNGLFQTGNISKRVPTFREASLAIKKRNLNVPDLQQVLHEDDEARFIANKFINTV
IDPNKLAQFPGYISEGEMGYFNKYLSGKAVPDDAFVDPCALVSMDKYRHMIKTQLKPV
EDTSQLFERPLAATITYHDKGKVMSTSPIFLMMCNRLLLCLNDKISIPSGKHHQLFSL
DPFAFEMTKEFKEIDFSKFDKSQQRLHHLIQFHIFTALGAPKDFLDMWFGSHEISHIR
DGPCGIGFSVNYQRRTGDACTYLGNTIITLSTLAYMYDLLDPNVTFVIASGDDSLIGS
IKPLDRSEEFKFVTLFNFEAKFPHNQPFVCSKFLCLLPTVSGGKKVLAVPNALKLNIK
LGVKDLAPCVFDAWYKSWLDLIWYFDNYLVVSTMKDYISHRYLRRQTCYQEGAMLAYR
TIFSSKEKCLKSLFGITSKDLEAMLPMSKNGKGSNRAECSKNNKTSRPPKSTRCGNSA
N"
BASE COUNT 717 a 469 c 619 g 786 t
ORIGIN
1 gtttttgtac tcgtggttga gttacaatga atcctctaaa tcagctattg tcacatgggt
61 gttctgctat ttcctcagct ttacatagag atgttgctta cacccagatt tctgatgagt
121 gttttgattc tcatttcact cagatttcca ccgaatactt tcttactact tccgctagga
181 aattgtttga agcgtacatg gtgacgatgt ttcttaagaa gcatatgagt tatgtcttcg
241 aggactttat aggatccgag atgggtccgt atgtccagac cagatggcgg atcgtttttg
301 atctggacga ggtcgaagaa gaatatgtct acaaacccga cttctatcat tacgatgttt
361 atgattacga aatgggtgtg gatatacctg catcgataat ggacgatatt ccattctgtg
421 aagatgcaga agcagtgacg tgtcgcaatt gtggtagttt cgatgagata gaaacggtgt
481 accaagcagc gacgtcttct gacgagtcat gtgccaacgt ttgtgatgtt gatgcccctc
541 acgataccat caagtggtct gacgaacccg atttgacggt agatgaccta tcgaagttgc
601 acgatttgga cgatgaagtt ccgcagttgc aattagagac tgttggtcgg gtagtgcagt
661 ccgtggagcc tttggtcccg gacattaact cgttcgagac gaatcagttg cacttagtga
721 aggaagtggt attggacaga tttgagtcca tacttgaatg tcacgaaaag gtattggcta
781 gaaacgattg gaagtctcta gctatgtatg taccgactgg tgagattcca tcagttagtg
841 acatattgga aattccggta aaacacacgc aaccggagtt cattcaaatg gcaatagatg
901 agatgttgcc aggagtttca gatcttgatg ataggttttt ccaagaaata gttgaaacgt
961 ctgacattaa tttggagata gacagagcat ctatcgatat gtcagtgttc aacgactgga
1021 ctccgaagtc gggtagactg aatggactgt tccaaacagg taatatctcg aaaagagtac
1081 cgactttccg cgaagcgtct ctcgctatta agaagcggaa tttgaatgtc cctgatttgc
1141 agcaagtttt gcatgaggac gatgaagcta gatttatagc taataagttc ataaacaccg
1201 ttatcgatcc gaataaattg gctcagtttc caggatacat atccgaaggt gaaatgggtt
1261 atttcaataa gtatctatca gggaaagctg tacccgatga tgcttttgtg gatccatgtg
1321 cgttggtctc gatggacaag tatcgacata tgattaagac acaacttaaa cctgtcgaag
1381 atacgtctca attgttcgag agacctttag cggcaactat tacttatcat gacaaaggaa
1441 aggttatgtc aacatcaccg atattcttga tgatgtgtaa tcgtttgctg ctgtgtttga
1501 acgataagat ttccattcct tcgggaaaac atcatcagtt gttctcgttg gatccctttg
1561 cgtttgaaat gacgaaagag tttaaagaga ttgatttttc gaaattcgat aagtctcagc
1621 aaaggttaca tcacctgatt caatttcaca ttttcaccgc tttaggtgct ccgaaagatt
1681 tcctcgatat gtggtttggt tcacacgaga tatcgcacat ccgtgatgga ccttgtggta
1741 tcggatttag tgtgaattac cagaggcgta caggagatgc atgcacgtat ttgggtaata
1801 ctattatcac tttgtctacc ctggcgtaca tgtatgactt gctggatccg aacgtgacgt
1861 ttgtcatagc ttcaggagac gatagtctta taggttcaat taaacctctg gaccgatctg
1921 aagagtttaa atttgtcacg ttgttcaatt ttgaagcgaa atttccacat aaccaacctt
1981 ttgtgtgcag taaattttta tgtttactgc ctactgtgag tgggggaaag aaggttctgg
2041 cggttccgaa tgctttaaag ttgaatataa aactaggtgt taaggatctg gcaccatgtg
2101 tttttgatgc ttggtataaa tcctggttgg atttaatttg gtacttcgat aattacctgg
2161 ttgtgtcgac tatgaaagac tatatcagcc ataggtattt aagaagacag acatgttacc
2221 aagaaggtgc gatgttggct tataggacga tattctcgag taaagagaaa tgtttgaagt
2281 ccttgtttgg tatcacttcc aaagatttgg aagcgatgtt gcccatgagt aagaatggca
2341 aaggctctaa tagagccgag tgttcaaaga ataacaaaac atctagacct ccgaagagta
2401 ctagatgtgg gaattctgcg aactagaacg agttgaacgc gttcgaattt cctcgaatag
2461 agaagaatcg taccaccgtg tgggtttgcg attagttcct agagagttgc ttccggctct
2521 cgagttcata ggtacttacc tgctttgcag atgcctacga cgtgaagtcg tagatgcccg
2581 gatagggaag c
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