LOCUS       LC333865                 852 bp    DNA     linear   BCT 04-SEP-2018
DEFINITION  Pseudomonas lactis YT4 rpoB gene for DNA-directed RNA polymerase
            subunit beta, partial sequence.
ACCESSION   LC333865
VERSION     LC333865.1
KEYWORDS    .
SOURCE      Pseudomonas lactis
  ORGANISM  Pseudomonas lactis
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Kashiwagi,A. and Toba,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Akiko Kashiwagi
            Hirosaki University, Faculty of Agriculture and Life Science; 3,
            Bunkyocho, Hirosaki, Aomori 036-8561, Japan
            URL    :http://nature.cc.hirosaki-u.ac.jp/english
REFERENCE   2  
  AUTHORS   Tanaka,C., Yamada,K., Takauchi,H., Inokuchi,Y., Kashiwagi,A. and
            Toba,T.
  TITLE     Characterization of a lytic bacteriophage for controlling
            Pseudomonas lactis in raw cow's milk
  JOURNAL   Appl. Environ. Microbiol. 84, e00111-18 (2018)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/AEM.00111-18
COMMENT     
FEATURES             Location/Qualifiers
     source          1..852
                     /collected_by="Takahiro Toba"
                     /country="Japan:Aomori"
                     /db_xref="taxon:1615674"
                     /isolation_source="raw cow's milk"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas lactis"
                     /strain="YT4"
     CDS             <1..>852
                     /codon_start=1
                     /gene="rpoB"
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="BBB33710.1"
                     /transl_table=11
                     /translation="GSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDV
                     HPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVKDALVTDEIVFLSA
                     IEEADHVIAQASATMNDKKVLIDELVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAAS
                     LIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVCVVARRGGVI
                     DSVDASRIVVRVADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDI
                     MADGPSTD"
BASE COUNT          175 a          261 c          246 g          170 t
ORIGIN      
        1 ggttccagcc agctttcgca gttcatggac cagaacaacc cgctctccga gatcacccac
       61 aagcgccgtg tttctgcact gggcccgggc ggtctgaccc gtgagcgtgc aggctttgaa
      121 gttcgtgacg tacacccgac gcactacggt cgtgtttgcc cgatcgaaac gccggaaggt
      181 ccgaacatcg gtctgatcaa ctccctggcc gcttatgcgc gcaccaacca gtacggcttc
      241 ctcgaaagcc cgtaccgtgt ggtgaaagac gctctggtca ccgacgagat cgtgttcctg
      301 tccgccatcg aagaagctga tcacgtgatc gctcaggctt cggccacgat gaacgacaag
      361 aaagtcctga tcgacgagct ggtagctgtt cgtcacttga acgagttcac cgtcaaggcg
      421 ccggaagacg tcaccttgat ggacgtttct ccgaagcagg tagtgtcggt tgcagcgtcg
      481 ctgatcccgt tcctggaaca cgatgacgcc aaccgtgcgt tgatgggttc caacatgcag
      541 cgtcaagctg taccgaccct gcgtgctgac aagccgctgg taggtaccgg catggagcgc
      601 aacgtagccc gtgactccgg cgtttgcgtc gtggctcgtc gtggcggcgt gatcgactcc
      661 gttgatgcca gccgtatcgt ggttcgtgtt gccgatgacg aagtagaaac tggcgaagcc
      721 ggtgtcgaca tctacaacct gaccaaatac acccgctcga accagaacac ctgcatcaac
      781 cagcgtccgc tggtgagcaa gggtgatcgc gttcagcgta gcgacatcat ggccgacggc
      841 ccgtccaccg ac
//