LOCUS       LC269861                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ03.
ACCESSION   LC269861
VERSION     LC269861.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ03"
                     /isolate="09GH.NJ03"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66828.1"
                     /transl_table=1
                     /translation="PQITLWQRPVVTVRVGEQLIEALLDTGADDTVLEEINLPGKWKP
                     KMIGGIGGFIKVRQYDQILMEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDKEFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTSNPE
                     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPEKDSWTVNDIQKLVGKLNW"
BASE COUNT          436 a          175 c          227 g          257 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccagta gtcacagtaa gagtagggga acagctaata
       61 gaagccctat tagatacagg agcagatgat acagtattag aagaaataaa tttaccagga
      121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
      181 cagatactta tggaaatttg tggaaaaagg gctataggta cagtattagt aggacctaca
      241 cctgtcaaca taattgggcg aaacatgttg actcagattg gttgtacttt aaatttccca
      301 attagtccta ttgaaactgt gccagtaaag ctaaaaccag gaatggatgg cccaaaggtt
      361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagagatg
      421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaacc catacaatac tccaatattt
      481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat
      541 aagagaactc aagacttctg ggaggtccaa ttaggaatac ctcatcctgc aggattaaaa
      601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat
      661 aaagaattta gaaagtacac agctttcact atacctagtc taaataatga aacaccaggg
      721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatctttcag
      781 gcaagtatga caaagatctt agagcccttt agaacaagca atccagaaat agtgatctac
      841 caatatatgg atgatttata tgtaggatca gacttagaga tagggcaaca tagagcaaaa
      901 atagaggagt tgagagaaca tttattgaaa tggggattta ccacaccaga caaaaaacat
      961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa gtggacagtc
     1021 caacctatac agctgccaga aaaagacagc tggactgtca atgatataca gaaattagtg
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269862                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for truncated pol protein,
            partial cds, isolate: 09GH.NJ34.
ACCESSION   LC269862
VERSION     LC269862.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ34"
                     /isolate="09GH.NJ34"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..126
                     /codon_start=1
                     /gene="pol"
                     /note="Truncated pol protein due to a premature stop
                     codon"
                     /product="truncated pol protein"
                     /protein_id="BBA66829.1"
                     /transl_table=1
                     /translation="PQITLWQRPVISVRIEGKLIEALLDTXADDTVLEEINLPGK"
BASE COUNT          433 a          169 c          224 g          259 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccagta atctcagtaa gaatagaggg aaagctaata
       61 gaagccctat tagacacagr agcagatgat acagtattag aagaaataaa tttaccagga
      121 aaatgaaaac caaaaatgat agggggaatt gaaggtttta ttaaagtaag acagtatgat
      181 cagatactta taaaaatttg tgaaaaaaag gcaataggta cagtattagt agggcctaca
      241 cctgtcaaca taattgggcg aaacatgttg actcaaattg gttgtacatt aaattttcca
      301 attagtccta ttgaaactgt gccagtaaaa ttaargccag gaatggatgg cccaaaagtt
      361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagacatttg tacagagatg
      421 gaaaaggaag gaaaaatttc aagaattggg cctgagaatc catacaatac tccagtattt
      481 gctataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agarcttaat
      541 aagagaactc aagacttctg ggargtycaa ttaggaatac ctcaycccgc aggattaaaa
      601 aagaayaaat cagtaacaat actagatgtg ggggatgcat atttttcagt tcccttggat
      661 gaggatttta gaaagtatac agcattcacc atacctagta caaataatga aacaccaggg
      721 attagatatc agtataatgt gctgccacaa ggatggaaag gatcaccagc aatttttcag
      781 gcaagcatga caaaaatctt acagcctttt agaacagaaa atccagagat ggtgatctat
      841 caatatgtgg atgayttata tgtaggatca gatttagaga tagggcagca tagagcaaaa
      901 atagagaagc tgagagagca tctactgaga tggggattta ccacaccaga caaaaarcat
      961 caraaagaac ctccatttct ttggatgggg tatgaactcc atcctgacaa atggacagtc
     1021 cagcctatac aactgccaaa taaagactgc tggactgtca atgatataca gaagttagtg
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269863                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ40.
ACCESSION   LC269863
VERSION     LC269863.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ40"
                     /isolate="09GH.NJ40"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66830.1"
                     /transl_table=1
                     /translation="PQITLWQRPLVTVRIGEQLIEALLDTGADDTVLEEINLPGRWRP
                     KMIGGIGGFIKVRQYDQILMEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPIF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDEEFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKHNPE
                     IIIYQYMDDLYVGSDLEIGQHRAKVEELREHLLKWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPDKDSWTVNDIQKLVGKLNW"
BASE COUNT          426 a          169 c          233 g          266 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta gttacagtaa gaatagggga acagttaata
       61 gaagctctat tagatacagg agcagatgat acagtattag aggaaataaa tttaccagga
      121 agatggagac caaaaatgat agggggaatt ggcggtttta tcaaagtaag acaatatgat
      181 cagatactaa tggaaatttg tggaaaaagg gccataggta cagtattagt aggacccacg
      241 cctgtcaaca taattggaag aaatatgttg actcaaattg gttgtacttt aaattttcca
      301 attagtccta ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg accaaaggtt
      361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagacatttg tacagagatg
      421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaacac tccaatattt
      481 gctataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag agagctcaat
      541 aaacgaactc aagacttctg ggaggtccaa ttaggaatac ctcatcctgc gggattaaaa
      601 aagaaaaaat cagtaacagt actagatgta ggggatgcat atttttcagt tcctttagat
      661 gaagaattta gaaagtatac tgcattcact atacctagtg taaataatga gacaccaggg
      721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag
      781 gcaagcatga caaaaatttt agagcccttt agaaaacata atccagaaat aattatctat
      841 caatacatgg atgacttgta tgtaggatct gatttggaaa tagggcagca tagagcaaaa
      901 gtagaggagt tgagagaaca tctrctgaaa tggggattta ctacaccaga caaaaagcat
      961 cagaaggaac ctccatttct ttggatggga tatgagctcc atcctgacaa atggacagtc
     1021 cagcctatac agttgccaga caaagacagc tggactgtca atgatataca gaaattagta
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269864                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ44.
ACCESSION   LC269864
VERSION     LC269864.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ44"
                     /isolate="09GH.NJ44"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66831.1"
                     /transl_table=1
                     /translation="PQITLWQRPVVTVKIAGQLKEALLDTGADDTVLEDINLPGKWKP
                     KMIGGIGGFIKVRQYDQILIEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDENFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQASMTKILEPFRSQNPE
                     IIIYQYMDDLYVGSDLEIGQHRAKIEELRAHLLRWGLTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPEKDSWTVNDIQKLVGKLNW"
BASE COUNT          416 a          171 c          231 g          258 t
ORIGIN      
        1 cctcaaatca ctctttggca acgacccgtt gtcacagtaa aaatagcagg gcagctaaaa
       61 gargctctat tagatacagg agcagatgat acagtaytag aagacataaa tttgccagga
      121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
      181 cagatactta tagaaatttg tggraaaagg gctataggta cagtattggt aggacctaca
      241 cctgtcaaca taattggrag aaacatgttg actcagattg gttgtacttt aaattttcca
      301 attagtccta ttgaaactgt accagtaact ttaaaaccag gaatggatgg accaaargtt
      361 aagcaatggc cattgacaga agaaaaaata aaagcattra cagaratttg taaagagatg
      421 gaagaggaag gaaaaatytc aaaaattggg cctgaaaatc catacaatac tccagtattt
      481 gctataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag agagctsaat
      541 aaaagaactc aggacttctg ggaagttcaa ttagggatac cgcatccagc rggtttgaaa
      601 aagaaaaaat cagtaacagt actrgatgtg ggggacgcat acttttcagt tcctttagat
      661 gaaaacttta gaaagtatac tgcgttcacc atacctagta caaacaatga gacaccagga
      721 gtcagatatc agtacaatgt gctgccacag ggatggaaag gttcaccagc aatatttcar
      781 gcaagcatga caaaaatttt agarcccttt agatcacaaa atccagaaat aattatytat
      841 caatacatgg atgayttgta tgtaggatct gatttggaaa taggacagca tagagcaaaa
      901 atagaggagc tgagagctca tctattgagr tggggattaa ctacaccaga caaaaagcat
      961 cagaaggaac ctccatttct ttggatggga tatgagctcc atcctgacaa atggacagtc
     1021 cagcctatac arytgccaga aaaagacagc tggactgtca atgatataca gaaattagtg
     1081 ggaaaaytaa attgg
//
	

LOCUS       LC269865                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ46.
ACCESSION   LC269865
VERSION     LC269865.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ46"
                     /isolate="09GH.NJ46"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66832.1"
                     /transl_table=1
                     /translation="PQITLWQRPLVTAKIGGQLIEALLDTGADDTVLEEIXLPGKWKP
                     KMIGGIGGFIKVRQYDQIHLEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPIF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVP
                     LDXDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRVKNPE
                     MVIYQYMDDLYVGSDLEIEQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQSIELPEKDSWTVNDIQKLVGKLNW"
BASE COUNT          435 a          173 c          220 g          254 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta gtcacagcaa aaataggggg acagctaata
       61 gaagccctat tagacacagg agcagatgat acagtaytag aagaaatawa tttaccagga
      121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
      181 caaatacatc tagaaatttg tggaaaaaag gccataggta cagtattagt aggacctaca
      241 cctgtcaaca taatwggacg aaatatgttg actcagattg gttgtactyt aaattttcca
      301 attagtccta ttgaaactgt accagtaaaa ttaaarccag gaatggatgg cccaaaggtt
      361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagacatttg tacagaaatg
      421 gaaaaggaag gaaagatttc aaaaattgga cctgaaaatc catacaatac tccaatattt
      481 gcaataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaactcaay
      541 aagagaactc aagacttctg ggaggtccaa ttaggaatac ctcatcccgc gggattraaa
      601 aagaayaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat
      661 raagacttta gaaagtatac tgcattcact atacctagtg taaataatga gacaccaggg
      721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag
      781 gcaagcatga caaaaatctt agagcccttt agagtaaaaa atccagaaat ggtaatttac
      841 caatatatgg atgatttgta tgtaggatct gacttagaga tagagcagca yagagcaaaa
      901 atagaggagt tgagagaaca tctattgaga tggggattta ccacaccaga caaraaacat
      961 cagaargaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc
     1021 cartctatag aactgccaga aaaagacagc tggactgtca atgatataca gaaattagta
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269866                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ59.
ACCESSION   LC269866
VERSION     LC269866.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ59"
                     /isolate="09GH.NJ59"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66833.1"
                     /transl_table=1
                     /translation="PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEDINLPGKWKP
                     KMIGGIGGFIKVRQYDQIAIEICGKKAIGSVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLXPGMDGPKVKQWPLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVF
                     AIKKKDSTKWRKLVDFRELNKRTQDFCEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
                     IVIYQYMDDLYVGSDLEIGQHRAKVEELREHLLKWGLTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPEKDSWTVNDIQKLVGKLNW"
BASE COUNT          428 a          172 c          232 g          257 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta gtcacagtaa gaataggggg acagctaata
       61 gaagccctat tagayacagg agcagatgay acagtattag aagayataaa tttaccagga
      121 aaatggaaac craaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat
      181 cagatagcta tagaaatttg tggaaaaaag gctataggtt cagtattagt aggacctaca
      241 cctgtcaaca taattggacg aaayatgttg actcagattg ggtgtacttt aaattttcca
      301 attagtccta ttgaaactgt accagtaaaa ttaargccag gaatggatgg tccaaaagtt
      361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tgcagagatg
      421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
      481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat
      541 aagagaactc aagacttctg cgaggtccaa ttaggaatac ctcatcctgc aggattaaaa
      601 aagaagaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat
      661 gaagacttta gaaagtatac tgcattcact atacctagtg taaataatga gacaccaggg
      721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag
      781 gcaagcatga caaaaatctt agagcccttt agaacaaaaa atccagagat agtgatctac
      841 caatatatgg atgatttata tgtaggatct gacttggaga tagggcagca cagagcaaaa
      901 gtagaggagt tgagagaaca tctactgaaa tggggattaa ccacaccaga taaaaaacat
      961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc
     1021 cagcctatac agctaccaga gaaggacagc tggactgtca atgatataca gaaattagtg
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269867                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ63.
ACCESSION   LC269867
VERSION     LC269867.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ63"
                     /isolate="09GH.NJ63"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66834.1"
                     /transl_table=1
                     /translation="PQITLWQRPVVKVRIEGQLIEALLDTGADDTVLEEINLPGKWKP
                     KMIGGIGGFIKVRQYDQIIIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
                     IIIYQYVDDLYVXSDLEIGQHRTKIEELREHLLRWGFTTPDKKYQKEPPFLWXGYELH
                     PDKWTVQPVQLPNKDSWTVNDIQKLVGKLNW"
BASE COUNT          435 a          172 c          227 g          255 t
ORIGIN      
        1 cctcaaatca ctctttggca acgacccgta gtcaaagtaa gaatagaggg acagctaata
       61 gaagctctat tagacacagg agcagatgat acagtattag aagaaataaa tttaccagga
      121 aaatggaaac cgaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
      181 cagataatta tagaaatttg tggaaaaaag gccataggta cagtattagt aggacctaca
      241 cctgtcaaca tmattggacg aaacatgttg acccagattg gttgtacytt aaattttcca
      301 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaggtt
      361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg
      421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt
      481 gccataaaga aaaaggatag tactaaatgg agaaaattag tagatttcag ggaactcaat
      541 aagagaactc aagatttctg ggagatccaa ttgggaatac ctcatcccgc aggrttaaaa
      601 aagaaaaaat cagtaacagt actggaygtg ggggatgcat atttttcagt tcccttagac
      661 aaagaattta gaaagtatac tgcattcact atacctagta cgaataatga gacaccaggg
      721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag
      781 gcaagcatga caaaaatctt agagcctttt agaacaaaaa atccagagat aataatctac
      841 caatatgtgg atgatttata tgtagsatca gacttagaga tagggcagca tagaacaaaa
      901 atagaggagt tgagagaaca tctactgagg tggggattta ccacaccaga caaaaaatat
      961 cagaaagaac ctccatttct ttggmtggga tatgaactcc atcctgataa atggacagtc
     1021 cagcctgtac agttgccaaa caaagacagc tggactgtca atgatataca gaaattagta
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269868                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ74.
ACCESSION   LC269868
VERSION     LC269868.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ74"
                     /isolate="09GH.NJ74"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66835.1"
                     /transl_table=1
                     /translation="PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEEIDLPGKWKP
                     KMIGGIGGFIKVRQYDHILIEISGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPE
                     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPNKEVWTVNDIQKLVGKLNW"
BASE COUNT          440 a          178 c          225 g          252 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta gtcacagtaa aaataggggg acagctaata
       61 gaagccctat tagacacagg agcagatgac acagtattag aagaaataga tttaccagga
      121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
      181 catatactta tagaaattag tggaaaaaag gctataggga cagtattagt aggacctaca
      241 cctatcaaca taattgggag aaatatgtta actcagattg gctgtacttt aaactttcca
      301 ataagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagggtt
      361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg
      421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaacac cccaatattt
      481 gccataaaga aaaaagacag tactaaatgg agaaaattgg tagatttcag agaactcaat
      541 aaaaggactc aagacttctg ggaggtccaa ttagggatac ctcaccccgc agggttaaaa
      601 aagaaaaaat cagtaacagt attagatgtg ggagatgcat acttttcagt tcccttagat
      661 gaaaatttta gaaaatatac tgcatttact atacctagtg taaacaatga gacaccagga
      721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatatttcag
      781 agtagcatga caaaaatctt agagcccttt agagcaaaaa acccagaaat agtaatctac
      841 cagtacatgg atgatttata tgtaggatct gacttagaaa tagggcagca tagagcaaag
      901 atagaggagt taagagaaca tttattaaga tggggattta ccacaccaga taaaaaacat
      961 caaaaggaac ctccattcct ttggatggga tatgagctcc atcctgacaa atggacggta
     1021 caacctatac agctgccaaa caaggaagtc tggactgtca atgatataca aaagttagtg
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269869                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ76.
ACCESSION   LC269869
VERSION     LC269869.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-20"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ76"
                     /isolate="09GH.NJ76"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66836.1"
                     /transl_table=1
                     /translation="PQITLWQRPLVPVKIGGQLIEALLDTGADDTVLEEIDLPGKWKP
                     KMIGGIGGFIKVRQYDQVLIEISGRKAIGTVLVGPTPINIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEEKISKIGPENPYNTPIF
                     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
                     LDESFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPE
                     IVIYQYMDDLYVGSDLEIGQHRAKIKELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPNKEVWTVNDIQKLVGKLNW"
BASE COUNT          437 a          178 c          229 g          251 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta gtcccagtaa aaataggggg acagctaata
       61 gaagccctat tagatacagg agcagatgac acagtattag aagaaataga tttaccagga
      121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcagtatgat
      181 caagtactta tagaaattag tggaagaaag gctataggga cagtattagt aggacctaca
      241 cctatcaaca taattgggag aaatatgttg actcagattg gctgtacttt aaactttcca
      301 ataagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagggtt
      361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg
      421 gaaaaggaag aaaaaatttc aaaaattggg cctgaaaatc catacaacac tccaatattt
      481 gccataaaga aaaaagacag tactaaatgg agaaaattgg tagatttcag agaactcaat
      541 aaaaggactc aagacttctg ggaggtccaa ttagggatac ctcaccccgc ggggttaaaa
      601 aaaaaaaaat cagtaacagt attagatgtg ggagatgcat acttttcagt tcccttagat
      661 gaaagcttta gaaagtatac tgcatttact atacctagta gaaacaatga gacaccagga
      721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatatttcag
      781 agtagcatga caaaaatctt agagcccttt agagcaaaaa acccagaaat agtgatctac
      841 caatacatgg atgatttata tgtaggatct gacttagaaa tagggcagca tagagcaaag
      901 ataaaggagt taagagaaca tttattaaga tggggattta ccacaccaga taaaaaacat
      961 caaaaggaac ctccattcct ttggatggga tatgagctcc atcctgacaa atggacggta
     1021 caacctatac agctgccaaa caaggaagtc tggactgtca atgatataca aaagttagtg
     1081 ggaaaactaa attgg
//
	

LOCUS       LC269870                1095 bp    RNA     linear   VRL 09-NOV-2017
DEFINITION  Human immunodeficiency virus 1 pol gene for pol protein, partial
            cds, isolate: 09GH.NJ95.
ACCESSION   LC269870
VERSION     LC269870.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Nii-Trebi,N.I., Ibe,S. and Ampofo,W.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2017) to the DDBJ/EMBL/GenBank databases.
            Contact:Nicholas Israel Nii-Trebi
            University of Ghana School of Biomedical and Allied Health
            Sciences, Medical Laboratory Sciences; Accra, Ghana
            URL    :http://chs.ug.edu.gh/
REFERENCE   2
  AUTHORS   Nii-Trebi,N.I., Brandful,J.A.M., Ibe,S., Sugiura,W., Barnor,J.S.,
            Bampoe,P.O., Yamaoka,S., Matano,T., Yoshimura,K., Ishikawa,K. and
            Ampofo,W.K.
  TITLE     Dynamic HIV-1 genetic recombination and genotypic drug resistance
            among treatment-experienced adults in northern Ghana
  JOURNAL   J. Med. Microbiol. 66, 1663-1672 (2017)
  REMARK    DOI:10.1099/jmm.0.000621
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1095
                     /collection_date="2009-02-27"
                     /country="Ghana:Tamale"
                     /db_xref="taxon:11676"
                     /host="Homo sapiens subject #NJ95"
                     /isolate="09GH.NJ95"
                     /isolation_source="plasma"
                     /mol_type="genomic RNA"
                     /organism="Human immunodeficiency virus 1"
     CDS             <1..>1095
                     /codon_start=1
                     /gene="pol"
                     /product="pol protein"
                     /protein_id="BBA66837.1"
                     /transl_table=1
                     /translation="PQITLWQRPLXTVRIGGQLIEALLDTGADDTVLEDINLPGKWKP
                     KMIGGIGGFIKVRQYDQILMEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
                     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIXICAEMEKEGKISKIGPENPYNTPVF
                     VIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVXVLDVGDAYFSVP
                     LDKDFRKYTAFTIPSVNNEKPGIRYQYNVLPQGWKGSPAIFQASMIKILEPFRTNNPE
                     MVIYQYMDDLYVGSDLEIGQHRAKIEELRKYLLKWGFTTPDKKHQKEPPFLWMGYELH
                     PDKWTVQPIQLPXKDXWTVNDIQKLVGKLNW"
BASE COUNT          428 a          175 c          226 g          257 t
ORIGIN      
        1 cctcaaatca ctctttggca acgaccctta rtcacagtaa gaataggggg ccagctaata
       61 gaagccctat tagacacagg agcagatgat acagtattag aagacataaa tttaccagga
      121 aaatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
      181 cagatactta tggaaatttg tggraaaaag gccataggta cagtattagt aggacctaca
      241 ccggtcaaca taattggacg aaayatgttg actcagattg gttgtacttt aaattttcca
      301 attagtccta ttgaaaccgt gccagtaaaa ttaaagccag gaatggatgg cccaaaggtt
      361 aaacaatggc ccttgacaga agaaaaaata aaagcattaa tagakatttg tgcagaaatg
      421 gaaaaggaag gaaaaatttc aaaaattggc cctgaaaatc catacaatac tccagtattt
      481 gttataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat
      541 aagagaactc aagacttttg ggaggtccaa ttaggaatac ctcatcccgc gggattaaaa
      601 aagaaaaaat cagtarcagt actggatgtg ggggatgcat atttctcagt tcccctagat
      661 aaagatttta gaaagtatac tgcattcact atacctagtg taaataatga gaaaccaggg
      721 attagatatc agtacaatgt acttccacag ggatggaagg gatcaccagc aatatttcag
      781 gcaagcatga taaaaatctt agaaccatty agaacaaaca atccagagat ggtgatctac
      841 caatacatgg atgatttata tgtaggatct gacttagaga tagggcaaca cagagcaaaa
      901 atagaggagt tgagaaaata tctactgaaa tggggattca ctactccaga caaaaaacat
      961 cagaaagaac caccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc
     1021 cagcctatac agctgccaga maaagacary tggactgtca atgatataca gaaactagtg
     1081 ggaaaattaa attgg
//